Desulfobulbus oralis: CAY53_03435
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Entry
CAY53_03435 CDS
T05339
Name
(GenBank) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
deo
Desulfobulbus oralis
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deo03016
]
CAY53_03435
Enzymes [BR:
deo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CAY53_03435
Transfer RNA biogenesis [BR:
deo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CAY53_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AVD70652
UniProt:
A0A2L1GLV6
LinkDB
All DBs
Position
complement(796434..798455)
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AA seq
673 aa
AA seq
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MPHSLKKAMILPGTLIEYIDNGVFHCALVIAGSERKLRLLGHSGREFLLPESRILSASEE
RFAWERRSATQTLLQERCERRRALAAAIRLDELWELVSDEPEGGFAPDFLAGLHFGRDLD
DDRRAAFLRAVFADPFYFRYRNGQIHVNSAEQVEQLRRQREQAAIRARQVADAARWLSRM
RQGEAVHAEQWPERDQTIGMVQDWALERADSGTAELMRDIFKQAGLTAPDAARQLLVAAG
VWDEDENLALLRSDYPLVFSAESMACAALAQAPDAAALLAAPRCQDFRDLPLFTVDAEDT
RDFDDALHVSMQEGRLQVGIHITDVSRHVAPDGPLFAEARERATSMYFPEGQVPMLPESL
SQGLCSLIEGQVRPAFSFLVTLNEDCDILHSSITPSVVCVQRRLSYHEVDSLMRSEPAFR
LLNRLRQRLRQNRLKQGALFLSLPDVCFDLSDRKHIGVRLEPADSPARSMVAELMILANA
MAADYCAVRELPGLFRSQPPPRRRLLSGADNTILDIACQRQWLSRGELTTFPKTHSGLGL
NSYTTLTSPIRRFLDLVMQHQLGHALAGRGMLFSAEECKAFAGILQQNLARAAAIGQQRH
RYWILRYLEPREGERVKAMVISSNPRRVCLLLTDCLFEVDLPPMPSFHVEPGDTVRIHLA
RVRPAENMLRVEW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccgcattccctcaagaaagccatgattctccccggcactctcatcgaatatatagat
aacggcgtctttcactgtgccctggtgatcgccggcagcgaacggaaactccgcctgctc
ggccacagcggccgggaatttcttttgcccgaaagccgcatcctgagcgcctctgaagag
cgttttgcctgggagcggcgcagcgccacccagacgcttttgcaggaacgctgcgagagg
cgcagggccctggctgcggccatccggctggacgagctgtgggaactcgtaagcgacgag
ccggaaggcggttttgcccctgattttctggctgggctgcattttggcagggatttggac
gatgaccggcgcgccgcctttctccgcgcggtttttgccgaccccttctacttcaggtac
cgaaacggccagattcatgtcaacagcgccgagcaggtggagcagctcaggcgccagcgt
gagcaggccgccatccgtgcacggcaggtggcggacgcggcccgctggctgagccggatg
cggcagggcgaagcggtgcacgccgagcagtggccggagcgcgaccagaccatcggcatg
gtgcaggactgggcgctggaacgtgccgacagcgggacggccgagctgatgcgcgacatc
ttcaaacaggccggactgaccgcgccggatgcggcccgtcaattgctggtggccgccggc
gtctgggatgaggacgaaaatctggcgctcctgcgttcggattatcccctggtcttttcg
gcggaaagcatggcctgcgcggccctggcgcaggcgcccgacgcggcggcgctgctggcc
gcccccaggtgtcaggacttccgcgacctgcccctcttcaccgttgacgccgaagacacc
agggacttcgacgacgccctgcatgtgagcatgcaggagggccggctgcaggtcggcatt
cacatcaccgatgtcagccgccatgtggcgccagacggcccgctctttgccgaggcccgg
gagcgcgccacctccatgtactttccggaagggcaggtgcccatgctgccggagtcgctc
tctcagggtctgtgcagcctcatcgagggccaggtgcggccggccttcagttttctggtc
accctgaacgaagactgcgacattctgcacagcagcatcaccccttccgtcgtctgcgtg
cagcgccgcctgagctatcacgaggtggactcgctcatgcgcagcgaaccggccttcagg
ctgctgaaccgcctgcgccagcggctgcgccagaaccggctgaaacagggcgcgctcttt
ctgtctctccccgatgtgtgctttgacctgagcgaccggaagcatatcggcgtgcgcctg
gagcccgcggacagccctgcccgctccatggtcgccgagctgatgatcctggccaacgcc
atggctgcggactactgcgcggtgcgggagctgccggggctgtttcgctcgcagcccccg
ccgcgccgccgcctgctgagcggtgcggacaacaccatccttgacattgcctgccagcgc
cagtggctttcccggggcgagctgacaacctttcccaagacccacagcggcctgggcctg
aacagctacaccaccctgacctcgcccatccggcgttttctggatctggtcatgcagcac
cagcttggccacgcgctggccggcaggggcatgctcttttcggcggaggagtgcaaggcc
tttgccggtatcctgcagcagaatctggcccgggccgcggccataggccagcagcgccac
cgctactggattctgcgctatctggaaccgcgggaaggcgagcgggtgaaggccatggtg
atcagcagcaatcccagacgggtctgtttgctgctgacggattgcctctttgaggtggat
ctgccgcccatgccctcctttcatgtggagccgggcgacacggtgcgtatccatctggcg
cgcgtgcggccggcggagaacatgctcagggtggagtggtag
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