Desulfobulbus oralis: CAY53_04470
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Entry
CAY53_04470 CDS
T05339
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
deo
Desulfobulbus oralis
Pathway
deo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAY53_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deo03021
]
CAY53_04470
Transcription machinery [BR:
deo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAY53_04470
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
OEP
EcoEI_R_C
Motif
Other DBs
NCBI-ProteinID:
AVD72229
UniProt:
A0A2L1GRC1
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All DBs
Position
1014891..1016273
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AA seq
460 aa
AA seq
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MNLYLRDMGNLQLLSHEEELGLARIMEDGERRIQNAVLRLTLGMSALDDLAADLKRGTVR
ITAILKGLPEQEGEETAQAQAELLERIADAGHLARRRSGLFAELGQVALESDEGRRLARE
ILGCGQDISALFAPYRFRAQGLLSVADAVREIGQKFAKVRVAAQQRELLKAAGRPGEAPP
DPEALDRRISYELAGTLGVSWPVFESLQQEVETGRTTAKQAKDTLVQANLRLVVSVARKY
VQRGLPLTDLIQEGNMGLLKAVERYDYSRGFRFSTYATWWIRQAIHRAVADHGRTIRLPV
HVLEMINRMFRSSREFQQEEQREPTVQELAEKMGQPLESVSSTLKIAQDAISLDAPVDDE
ESAMLGDFIESHAYPDPQDISMEESLKRCLARVMHTLTPREEQVLRMRYGIELETDYTLE
EVGRCFRVTRERIRQIEVQALNKLRHPSRSSALQESYFAG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctacctgcgggatatggggaatctgcaacttttgagccacgaggaagaattg
ggtctggcccgcataatggaggacggggagcgccgtattcagaacgccgtgctccgcctg
acactgggcatgagcgcgcttgatgatctggcggctgacctgaaacggggtacggtacgg
atcacagccattctgaaaggtctgcccgagcaggaaggcgaggaaaccgcgcaggcacag
gccgagctgctggagcgcattgccgatgcgggacacttggcccggcgtcgcagcggtctt
tttgccgagttgggtcaggtggccttggagagtgatgagggccggcggctcgcccgggaa
attctggggtgcggccaggacatctcggccctgtttgccccataccgttttcgcgcccag
gggctgctctccgtggccgatgcggtcagggaaatcgggcagaagttcgccaaagtccgg
gttgcggcccagcagcgggaactgctcaaggcggcgggcaggccgggcgaggccccgccc
gacccggaggcgctggaccggcggatcagctatgagctggccggcactttgggcgtgagc
tggccggtcttcgagagcctgcagcaggaggtggagaccggccgcaccacggccaaacag
gcaaaagatacgctggtgcaggccaatctgcgtctggtggtttcggtggcgcgcaagtac
gtgcagcgcggtctgcccctgaccgatctgattcaggaaggcaacatgggcctgctcaag
gcggtggagcgctacgactattcccggggcttccgcttttccacctatgccacctggtgg
atccggcaggccattcaccgggccgtggcggatcatggccgcaccatccggctgccggtg
catgtgctggagatgatcaaccgcatgttccgcagctcgagggaattccagcaggaagag
cagcgggagcccacggtgcaggagctggcggagaagatggggcagccgctggaatccgtg
tcgtccaccctgaaaattgcgcaggacgccatttccctggatgcgccggtggacgatgag
gaaagcgccatgctgggtgatttcatcgaaagccacgcctatccggacccgcaggacatt
tccatggaggaaagcctgaagcgctgtctggcccgggtgatgcacaccctgacaccccgg
gaagagcaggtgcttcgcatgcgctacggcattgagctggaaaccgactatacgctggaa
gaggtggggcgctgtttccgggtgacccgtgagcgtatccgccagatagaagtgcaggcg
ctgaacaagctccgacatccatcccgaagcagtgcattgcaggaatcgtattttgcaggg
tag
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