KEGG   Desulfobulbus oralis: CAY53_04470
Entry
CAY53_04470       CDS       T05339                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
deo  Desulfobulbus oralis
Pathway
deo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:deo00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CAY53_04470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:deo03021]
    CAY53_04470
Transcription machinery [BR:deo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CAY53_04470
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 OEP EcoEI_R_C
Other DBs
NCBI-ProteinID: AVD72229
UniProt: A0A2L1GRC1
LinkDB
Position
1014891..1016273
AA seq 460 aa
MNLYLRDMGNLQLLSHEEELGLARIMEDGERRIQNAVLRLTLGMSALDDLAADLKRGTVR
ITAILKGLPEQEGEETAQAQAELLERIADAGHLARRRSGLFAELGQVALESDEGRRLARE
ILGCGQDISALFAPYRFRAQGLLSVADAVREIGQKFAKVRVAAQQRELLKAAGRPGEAPP
DPEALDRRISYELAGTLGVSWPVFESLQQEVETGRTTAKQAKDTLVQANLRLVVSVARKY
VQRGLPLTDLIQEGNMGLLKAVERYDYSRGFRFSTYATWWIRQAIHRAVADHGRTIRLPV
HVLEMINRMFRSSREFQQEEQREPTVQELAEKMGQPLESVSSTLKIAQDAISLDAPVDDE
ESAMLGDFIESHAYPDPQDISMEESLKRCLARVMHTLTPREEQVLRMRYGIELETDYTLE
EVGRCFRVTRERIRQIEVQALNKLRHPSRSSALQESYFAG
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaacctctacctgcgggatatggggaatctgcaacttttgagccacgaggaagaattg
ggtctggcccgcataatggaggacggggagcgccgtattcagaacgccgtgctccgcctg
acactgggcatgagcgcgcttgatgatctggcggctgacctgaaacggggtacggtacgg
atcacagccattctgaaaggtctgcccgagcaggaaggcgaggaaaccgcgcaggcacag
gccgagctgctggagcgcattgccgatgcgggacacttggcccggcgtcgcagcggtctt
tttgccgagttgggtcaggtggccttggagagtgatgagggccggcggctcgcccgggaa
attctggggtgcggccaggacatctcggccctgtttgccccataccgttttcgcgcccag
gggctgctctccgtggccgatgcggtcagggaaatcgggcagaagttcgccaaagtccgg
gttgcggcccagcagcgggaactgctcaaggcggcgggcaggccgggcgaggccccgccc
gacccggaggcgctggaccggcggatcagctatgagctggccggcactttgggcgtgagc
tggccggtcttcgagagcctgcagcaggaggtggagaccggccgcaccacggccaaacag
gcaaaagatacgctggtgcaggccaatctgcgtctggtggtttcggtggcgcgcaagtac
gtgcagcgcggtctgcccctgaccgatctgattcaggaaggcaacatgggcctgctcaag
gcggtggagcgctacgactattcccggggcttccgcttttccacctatgccacctggtgg
atccggcaggccattcaccgggccgtggcggatcatggccgcaccatccggctgccggtg
catgtgctggagatgatcaaccgcatgttccgcagctcgagggaattccagcaggaagag
cagcgggagcccacggtgcaggagctggcggagaagatggggcagccgctggaatccgtg
tcgtccaccctgaaaattgcgcaggacgccatttccctggatgcgccggtggacgatgag
gaaagcgccatgctgggtgatttcatcgaaagccacgcctatccggacccgcaggacatt
tccatggaggaaagcctgaagcgctgtctggcccgggtgatgcacaccctgacaccccgg
gaagagcaggtgcttcgcatgcgctacggcattgagctggaaaccgactatacgctggaa
gaggtggggcgctgtttccgggtgacccgtgagcgtatccgccagatagaagtgcaggcg
ctgaacaagctccgacatccatcccgaagcagtgcattgcaggaatcgtattttgcaggg
tag

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