Desulfobulbus oralis: CAY53_06075
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Entry
CAY53_06075 CDS
T05339
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03030
DNA replication
deo03430
Mismatch repair
deo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAY53_06075
03430 Mismatch repair
CAY53_06075
03440 Homologous recombination
CAY53_06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deo03032
]
CAY53_06075
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_06075
Enzymes [BR:
deo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAY53_06075
DNA replication proteins [BR:
deo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAY53_06075
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAY53_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AVD71103
UniProt:
A0A2L1GN49
LinkDB
All DBs
Position
1381004..1384543
Genome browser
AA seq
1179 aa
AA seq
DB search
MGNFVHLHLHTHYSFLDGAIRIPELMDRVRELGMDAVAITDHGVMYGALEFYDAARKAGI
KPIIGSELYLAENGMDSRGARAGRNFHLVALAMNEAGYHNLVQLASMAQVHGFYRKPRVD
WERLFEHNEGLIVTSACLQGEIAWRCVHDDLKTARQRAVEVQKVFGDRFYLELQENGIPE
QAVANRALMEIAKELGIGLVATNDCHYLLADDAQAHAVLLAIQCGKTLNDPGCFRYSTNT
LYVKSPGEMASAFGYCPEAIENTVRIAERCNVEFSFGKPFFPKFPLAEGHTLAGDFEAAC
WKGFETRMQEVARHRELGPELRQQYHDRLVMEIDVIRKMEFPAYFLIVADFINWAKDQGI
PVGPGRGSGAGSLAAFCMAITDIDPIAYGLIFERFLNIERKSMPDFDVDFCRDRRDEVLG
YVRERYGGDDYVSQIVAYGSMKARGVVRDVGRALDVPLAEVDRIAKLVPDDLNITLTRAL
AQEPRLKAAMQQDPLIQELIRISLRLEGLARHKSVHAAGVVISPSPITDFLPVCVKSEKD
GDVREIVTQYDKNYVEKVGLIKFDFLGLKTLTMIDKAVRGIEARCGRHLDINRLAVDDRE
TYRLLCRGDCLGVFQLESDGMRNLVVRMQPEQFTDLIALVALYRPGPLDSGMVDAFVDTK
HGRREAEYPLPQLKDVLEETYGVIVYQEQVMKISNILAGYSLGDADILRRAMGKKKPEIM
KQERSRFMEGARKNGIDPERAGHVFDLMEKFAGYGFNKSHSAGYAFVAYQTAYLKAHYPA
EFMAALLSCDVDNTDKVVKYIQECRRMGIGVLPPDINASFRDFTVSGDREIRFGLAAVKN
VGGAALDAIIEEREKAGAYRSLTDFCIRIDSAKVNRKVIESLIKVGVFDSLNANRAQLAA
MLDASMERAKAVWRERQSGQMSLFGAGPVALPEHGAEEVEAPVVDNWPELQRLAYEKEIA
GFYLTGHPLESVAAELELMTDFRLDRLGEALNGQVVRVGGLVAAYREHKTKKGERMAFVV
LEDLSGKVDLTVFPSLFARYDSLLTSDQPLIVVANVEQAEEGPKLTAEDIRTLPDALEHS
CEQLVLRLPAERLARERLAGLKDLFFQHHGGVAVQLVLDFPGRGEVDIDAGPDLGVRPNR
GLFRALRAEFGDQALRLRMRAARAASRGGRGRWRREAEG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactttgttcatctgcacctgcacacccattactcctttctggatggcgccatc
cgtattcccgaactgatggaccgggtacgggaacttggcatggatgctgtggcgattacc
gaccacggggtcatgtacggtgcgctggaattctacgatgcggccagaaaggccgggatc
aagcccatcatcggcagcgaactctacctggccgaaaatggcatggattcacggggtgcc
agggcggggcgcaattttcatctggttgccctggccatgaacgaagccggctaccacaac
ctggtgcaactggcttccatggcccaggtgcacggcttttaccgcaagccgcgcgtggat
tgggagcggctcttcgagcacaacgaagggctcatcgtcacgagcgcctgtctgcagggc
gagattgcctggcgctgcgtgcacgacgacctgaaaaccgcgcgccagcgggcagtcgag
gtgcagaaggtctttggcgaccgcttttatctggagctgcaggaaaacggcatcccggaa
caggcagtggccaaccgggcgctcatggagattgcgaaggaactgggcattggcctggtg
gctaccaacgactgtcactatctgctggccgacgatgcccaggcccatgcggtgctgctc
gccatccagtgcggcaaaaccctgaacgatcccggctgcttccgctattccaccaacacg
ctttacgtgaagtcgcctggggaaatggcctctgcctttggctattgcccggaggccatc
gaaaatacggtcagaatcgccgaacgctgcaacgtggaattctcctttggcaagcccttt
ttccccaagttcccactggccgagggccatacccttgcgggcgatttcgaggccgcctgc
tggaagggcttcgagacccgcatgcaggaggtggcccggcaccgcgaactcggcccggag
ctgcggcagcagtaccacgaccggctggtcatggagatcgatgtcatcaggaagatggag
tttccggcctattttctcattgtggccgacttcatcaactgggccaaggatcagggcatt
ccggtcgggccgggccgcggctccggcgcaggcagtctggccgctttctgcatggccatc
accgacatcgaccccattgcctatggcctgattttcgagcgctttctgaatatcgaacgc
aaatccatgccggatttcgacgtggacttctgccgcgaccgcagggacgaggtgctgggc
tatgtgcgcgagcgctacggcggagacgactacgtctcgcagatcgtggcctacggctcc
atgaaggcgcgcggtgtggtgcgcgacgtggggcgggccttggacgtgccgctggccgag
gtggacaggatcgccaagctcgtgccggatgatctgaacatcacgctcaccagggcgctg
gctcaggagccgaggctcaaggcggccatgcagcaggatcccctcattcaggaactgatc
aggatctcgctccggctcgaaggtctggcgcggcacaagtcggtgcatgcggccggggtg
gtcatttcgccgtctcccatcacggatttcctgccggtctgcgtgaagtcggaaaaggac
ggcgatgtccgggagatcgtcacccagtacgacaaaaactatgtggaaaaggtggggctc
atcaagttcgattttctgggcctgaaaacgctcaccatgatcgacaaggcggtgcgcggc
atcgaggcgcgatgcggcaggcacttggacatcaaccggctggccgtggacgaccgggaa
acctaccggctcctctgccggggcgattgcctgggtgtgttccagttggagagcgacggc
atgcgcaatctggtggtgcggatgcagccggagcagtttaccgatctgatcgctttggtg
gcgctttaccggccgggtcccctggattccggcatggtggacgcctttgtggacaccaag
catggccgccgggaggccgagtatccgctgccgcaactgaaggatgtcctggaggaaacc
tacggggttatcgtctaccaggaacaggtcatgaaaatatcaaatattctggccggttac
agtttgggagacgcggacatcctccgccgcgccatgggcaagaaaaagcccgaaatcatg
aagcaggagcgcagccgcttcatggagggggccaggaaaaacggcatcgatccggagcgg
gcggggcatgtttttgatctgatggagaaattcgcgggctacggtttcaacaagtcacac
tccgcaggctatgcctttgtcgcctaccagaccgcctacctgaaggcccactatccggcg
gaattcatggccgcactgttgtcctgtgacgtggacaacaccgacaaggtggtcaaatac
attcaggaatgcaggcgcatgggcattggggttctgccgccggatatcaatgcctcgttc
cgggacttcacggtcagtggcgaccgggagatccgctttggtctggcagccgtcaagaac
gtgggcggcgcggcactggacgccatcatcgaagagcgggaaaaggccggagcctacagg
tcgctcaccgatttctgcattcgcatcgactctgccaaggtgaaccgcaaggtcatcgaa
agcctgatcaaggtcggcgtgtttgattcgctgaatgccaaccgggcgcagttggccgcc
atgctggacgcgagcatggagcgggccaaagcggtgtggcgcgagcggcaaagcgggcag
atgagcctcttcggcgccggcccggtggccctgccggaacatggggcggaggaggtggag
gcaccggtggtggacaactggccggaactgcagcggctggcctatgaaaaggaaatagcg
ggcttttatctgaccgggcatcctttggaatctgtggccgccgagctggagctgatgacg
gatttccggctggacaggctgggtgaggcgctgaacggtcaggtcgtgcgcgtgggcggc
ctggtggctgcttaccgagagcacaagaccaagaagggcgagcgcatggcctttgtggtg
ctggaagacctgtcaggcaaagtggatctgaccgtttttccgagcctctttgccagatac
gattcgctgctgaccagcgatcagccgctcattgtggtggccaatgtggaacaggccgag
gaggggccgaaactgaccgccgaggatatccgcaccttgccggacgcgctggagcacagt
tgcgagcagcttgtgctgcgcctgccggcagagcggctggcccgcgagcggctggccggg
ctcaaggatctttttttccagcatcacggcggggttgcggtccaactggtgctggacttt
ccgggccggggcgaggtggacatcgatgccgggcccgacctgggcgtgcggccgaaccgg
ggcttgttccgtgctctcagggccgagttcggcgatcaggcgctgcgtctcaggatgcgg
gcggccagggccgcgtccagaggcggccggggccgctggcgcagagaagcggagggctaa
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