Desulfobulbus oralis: CAY53_09470
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Entry
CAY53_09470 CDS
T05339
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
deo
Desulfobulbus oralis
Pathway
deo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAY53_09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_09470
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAY53_09470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAY53_09470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AVD71669
UniProt:
A0A2L1GPR8
LinkDB
All DBs
Position
2141817..2143865
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AA seq
682 aa
AA seq
DB search
MPEQHAPTYDDTRPFTLVSSFSPSGDQPEAIARLTAGIRAGLRDQVLLGVTGSGKTFTMA
QVVAQIQRPTLVLAPNKTLAAQLFAEFRELFPHNAVEYFVSYYDYYQPEAYIPASDTYIE
KDSAVNDAIDKLRHSATRSLLTRRDVLIVASVSCIYGLGSPDEYKNMHLYLERGTDYPME
EVLRRLAFMLYERNDYSFHRGTFRVRGDVLDIFPVHEEERALRVEFFGDTIDSITLIDPL
RGVVLEDLQEVAVFPGSHFVTGADNLKRATKSIRDELQMRLAELHAAGRLVEEQRLEQRT
QFDLEMIEELGYCTGIENYSRHLTGKAPGAPPPNLLDYFPEDYLLMIDESHIAVPQIGGM
YNGDHARKQTLVNFGFRLPSALDNRPLRFDEFEARRHQTIYVSATPGPHELRLADGHVVE
QLIRPTGLLDPRIEVRPATAQVDDLLAEIRQRAERNEAVLVTTLTKRMAEDLTRYYEDLG
VRVRYLHSDIKTLERVELIRNLRQRKFDVLIGINLLREGLDIPEVSLVAVLDADKEGFLR
SERSLVQTCGRAARNASGMVILYADQVTPSMAATIRETERRRGIQEAYNQAHGIVPRTVI
SEIKDSVNQHLRASGWTPEEEQPALFQSAEPERVYHSGEELRRDIGELERRMREAAARLA
FEEAAGYRDRIRALKMLELALD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaacagcacgcccccacctacgatgataccagaccctttaccctggtctccagc
ttcagtccctcgggcgaccagccggaggccatcgccagactgacggccggcatcagagcc
ggactgcgggatcaggtcctgcttggcgtcaccggcagcggcaagaccttcaccatggcc
caggtggtggcccagatccagcggccgactcttgtgctggcgcccaacaagacgctcgcg
gcccagcttttcgccgagttccgcgagctctttccgcacaacgcggtggaatacttcgtc
tcctattacgactattaccagcccgaagcctatatcccggcttcagacacctacatcgag
aaggactcggccgtcaacgacgccatcgacaagctgcgccactcggccacccgctccctc
ctcacccggcgggacgtgctgatcgtggcctcggtgtcctgcatctacggtctgggctcg
ccggacgagtacaagaacatgcacctctatctggagcggggaaccgactatccgatggaa
gaggtgctccggcgactggccttcatgctctacgagcgaaacgactactccttccaccgc
ggcaccttccgggtgcgcggcgacgtcctggacatctttccggtgcatgaggaggaacgg
gcgctgagggtggaatttttcggcgacaccattgacagcatcacgctcatcgacccgctg
cgcggcgtggtgctggaagacctacaggaagtggcggtctttccgggcagccacttcgtg
accggagcggacaatctcaaacgggccacaaagagcatcagggacgagctgcagatgcgg
ctcgccgaactgcacgccgccggccgtctggtggaggagcagaggctggaacagcgcacc
cagttcgatctggagatgatcgaggaactgggctactgcacgggcatcgagaactacagc
cgccacctgaccggcaaggcgccgggcgcgccgcccccgaacctcctggattattttccg
gaggactatctgctgatgatcgacgaatcgcacatcgcggtgccgcagatcggcggcatg
tacaacggcgatcacgcccgcaagcagacgctcgtgaacttcggcttccgcctgccctcg
gccctggacaaccggccgctccgcttcgacgaattcgaggcgcgccggcatcagacgatt
tatgtctccgccacgcccggcccgcatgaactgcggctcgcggacggccacgtggtcgaa
caactgatccggccgaccggccttctggatccacgcatagaggtgcggccggccactgcc
caggtggacgatctgctggcagagatccgccagcgggcggaacgcaacgaggcggttctg
gtgacgaccctcaccaagcgcatggccgaggatctgacgcgatactacgaagacctgggc
gtccgggtgcgctatctccattcagacatcaagaccctcgaacgggtggagctgatccgc
aatctgcggcagcgcaaattcgatgtgctgatcggcatcaacctgctgcgcgaggggctg
gatattccggaggtctcgctggttgcggtcctggacgcggacaaggaaggctttctccgc
tctgagcgctcgctggtgcagacctgcggccgggcggcacgcaacgcgagcggcatggtc
attctgtatgccgaccaggtcaccccctccatggcggccaccatccgtgaaaccgagcgc
cgccgcggcattcaggaggcctacaaccaggcgcacggcattgtgccccgcaccgtgatt
tcggaaatcaaggactcggtgaaccagcacctcagggcttcgggctggactccggaagag
gagcagccggccctgttccagagcgcggaaccggagcgggtgtatcacagcggggaggaa
ttgcggcgcgacattggggagctggagcgcaggatgcgcgaggcggcagccaggctggcc
ttcgaggaggcggccggctatcgcgaccgcatccgggcattgaagatgctggagctggct
ttggattga
DBGET
integrated database retrieval system
