Desulfobulbus oralis: CAY53_10790
Help
Entry
CAY53_10790 CDS
T05339
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAY53_10790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deo03021
]
CAY53_10790
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_10790
Enzymes [BR:
deo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAY53_10790
Transcription machinery [BR:
deo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAY53_10790
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAY53_10790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
HNOBA
Motif
Other DBs
NCBI-ProteinID:
AVD71899
UniProt:
A0A2L1GQE2
LinkDB
All DBs
Position
complement(2429228..2433322)
Genome browser
AA seq
1364 aa
AA seq
DB search
MEDVFSFFAKPKEPVSFNRVKISLASPEKILEWSHGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLGHIALAAPVAHIWFLKSL
PSKIGSILDMTLKELERILYFESYAVVESSEEHLPVGSILSEDQYRKAMEDYPDRFRVGI
GAEAIREMLAALDLDALSETLRQEMRETGSATRRAKLGKRLNVVEAFRDSGNRPEWMILT
VIPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELDAPDIIIRNEKRMLQ
EAVDVLFDNGRRGRTITGPGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPH
LRLHQCGLPKKMALELFKPFIYSRLEQQGHVSTIKSARKMVEKGVKEVWDALEEIVQEYP
VILNRAPTLHRLGMQAFEVLLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSVEAQVEA
RVLMMSTNNILSPAHGGPIIIPSQDIVLGLYYMTRERPGAPGEGLVFGSPAEARIAFDQG
VAHMQARVKVRMKKDKRNDEEAAALVDTTIGRTLVGEILPDAVPFSLVNKEMSKKELAFL
IDYTYRHAGTKETVLLADRIKDLGYENSTLAGISISINDMKIPVSKEDLVAASEQEAAEV
EQQYASGQITDGEKYNKLVDIWTKATDKIIEEMMQEMSVDYIKGRDGKLQEIKSFNPVYI
MADSGARGSRDQIRQLAGMRGLMARPDGKIIETPIKANFREGLSVLEYFISTHGARKGLS
DTALKTANSGYLTRRLVDVAQDSTIVEHDCGTMQGTLAEPLIEGGEIITRIGERILGRVA
LDDVVDPHSGEVIVHADEEITEDKVEQIEAAGIDRVMIRSVLTCESRRGICAMCYGRDLG
RGHMVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGAAKGSIEQAEIRTQRGGEVCYRNLH
SVQNAEGHNIVMSRSSEILIRDEQGADRERFPVPYGATVVEKEGAKVEPGTVIAFWDAFS
LPIVAEVGGTVKYGDVVEGETMQERIDPVTGITSKVIMTSGFSKQVNPRISIKNEAGRTM
KLPDGQLFARYPLPAGAIITVNEGETISAGHVLAKIPRETTKSKDITGGLPRVAELFEVR
KPKEQAIISEIDGRVTFGKELKGKRRVIVVPEVGEAKEYLIPKSKPITVHENDHVEAGDP
LMDGSPLPNDILRVKGREEVARFLVNEIQEVYRLQGVKINDKHIETIVRQMLRRVRITHV
GDSSFMLDQQVEQWKFREENERLAREGLQAAAAEPLLLGVTKASLSTDSFIAAASFQETT
KVLTNAAMAGRVDDLSGLKENVIMGRLISAGTGLRRYRVNQGDE
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
gtggaagacgtattcagcttttttgcgaaacccaaggaaccggtcagtttcaacagggtc
aaaatctctctggcctcgccggaaaagatactggaatggtctcatggcgaagtcaagaag
ccggagaccatcaattaccgtaccttcaagcccgaacgcgatggcctgttctgcgccaaa
atcttcgggccggtcaaggactacgagtgtaactgcggcaagtacaagcgcatgaagcac
cgtggcgtggtctgtgaaaagtgcggtgtcgaggtcattcagtccaaggtccggcgtgag
cgcctggggcacatcgccctggcagcgccggtcgcccacatctggtttctgaagagcctg
ccctccaagatcggctctattctggacatgactctgaaggaactggaacgtattctttac
ttcgagtcctatgcggtggtcgagtccagcgaagagcatctgccggtgggcagcattctg
agcgaagaccagtaccggaaggccatggaggattatcccgacaggttccgggtcggcatt
ggcgccgaggctatccgcgagatgctggctgctctggatctggacgcgctttcggagacg
ctcaggcaggaaatgcgggagaccggctctgccaccaggcgggccaagctgggcaagcgg
ctgaacgtggtggaggcctttcgcgattccgggaaccggcccgagtggatgattctgacc
gtcattccggtgctgcccccggatttgcggcctctggtgcccctggaaggcgggcgtttc
gccacttcggacctgaacgatctctaccgccgggttatcaaccgcaacaaccgcctgaag
cggcttctggaactggacgcgccggatatcattatccgtaacgaaaagcgcatgctgcag
gaagcggtggatgtccttttcgacaatggtcgccgtggccgtaccatcaccggcccgggc
aagcggcccctgaagtcgctttccgatatgctgaaaggcaagcagggtcgctttcgccag
aatctgctgggcaagcgggtggactattccggccgttcggtcatcgtggtcgggcctcat
ctgcggctgcaccagtgcggtctgcccaagaagatggccctggagttgttcaagcccttc
atttacagccggcttgagcagcagggccacgtgagcaccatcaagagtgcccgcaagatg
gtggaaaagggggtaaaagaggtgtgggacgcccttgaggagatcgtgcaggagtacccg
gtcatcctgaaccgtgctccaaccctgcaccgtctgggcatgcaggccttcgaggtgctg
ttgatcgaaggcaaggccatccagttgcaccccttggtctgcacggcgttcaacgccgac
tttgacggtgaccagatggccgtgcacgtgccgctttcggtggaggcgcaggtcgaggcc
cgggtcctgatgatgtccacgaacaatatcctctcgccggcccacggcgggcccatcatc
attccgagccaggatattgtcctgggcctctactatatgacccgggaacggccgggcgcg
ccgggcgagggcctggttttcggctcgccggccgaggcgcgtatcgcctttgaccagggc
gtagcccacatgcaggccagagtcaaggtgcgcatgaagaaggacaagaggaacgacgag
gaggcagcggccctggtggataccaccattggccgcaccctggtgggtgaaatcctgccc
gacgccgtacctttttccctggtcaacaaggagatgtccaaaaaggaactggccttcctg
atcgattatacctatcgccacgccggcaccaaggaaacggtgcttctggccgaccggatc
aaggatctgggctatgagaactccaccctggcaggcatctccatctccatcaatgacatg
aagattcctgtgagcaaggaggatctggtcgcagcctccgagcaggaggctgcggaggtc
gaacagcagtacgcgagcggtcagattacggacggcgaaaagtacaacaagctggttgat
atctggaccaaggcgactgacaagatcatcgaagagatgatgcaggaaatgtcagtggac
tacatcaagggcagggacggcaaactccaggaaatcaagagcttcaacccggtctatatc
atggctgactcgggcgcccgcggttcccgggaccagatccgtcaattggccggcatgcgc
ggcctcatggccaggccggatggcaagatcatcgagacacccatcaaggccaatttccgc
gagggtctgagcgttctggagtacttcatctccacccatggcgcccgcaaaggcctgtcg
gatacggctttgaagaccgccaactccggctacctgacccgacgcctggtggacgtggcc
caggactcgacgattgtcgagcatgattgcggcaccatgcaggggacgctggccgagccc
ctgatcgaaggcggtgaaatcatcacccgcatcggcgagcgcattctgggccgggtggca
ctggatgacgtggtggatccgcacagcggcgaggtcattgtgcatgcggacgaggaaatc
acggaggacaaggtcgagcaaatcgaggctgcgggcatcgaccgggtgatgatccgttcg
gtgctgacctgcgagtccaggcgcggcatctgcgccatgtgctacggccgtgacctgggg
cgcggccacatggtcaacatcggcgaggccgtgggcatcattgccgcccagtccattggc
gagccgggtacccagctcaccatgcggaccttccacatcggtggcgcggccaagggttcc
attgagcaggccgaaatccgcacccaacgcggcggcgaggtctgctacaggaacctgcac
tccgtgcagaatgccgagggccacaacatcgttatgagccgcagctccgaaatcctcatc
cgcgacgagcagggggccgaccgggagcgcttcccggtgccctacggcgccaccgtggtg
gaaaaggagggcgcgaaggtcgagccaggcacggtcattgctttctgggacgccttttcc
ttgccgatcgtggccgaggtgggcggcaccgtcaaatacggcgatgtggtcgagggcgag
accatgcaggagcgcattgacccggtcacgggcattaccagcaaggtcatcatgacaagt
ggcttctccaaacaggtcaatccgcgcatcagcatcaaaaacgaggcgggcaggaccatg
aagctgccggacggtcagctctttgcccgttatccattgcccgcaggcgccatcatcacg
gtgaacgagggcgagacgatcagcgccggccacgtgctggccaagattccccgcgaaacc
accaaatccaaggatatcaccggtggtctgcccagggtcgcagagcttttcgaggtgcgc
aagcccaaggagcaggccattatcagcgaaatcgacggccgcgtcacctttggcaaggaa
ctgaaaggcaagcggcgggtcattgtggtgccggaagtcggcgaagccaaggaatacctg
attccgaaatccaagccgatcacggtgcatgaaaacgaccacgttgaggccggtgatccg
ctcatggacggttccccgctgcccaatgacattctgcgcgtcaagggccgggaagaggtg
gcccgcttcctggtcaacgagattcaggaggtgtatcgactccagggcgtcaagattaat
gacaaacacattgagaccatcgtgcggcaaatgctgaggcgggtgcgcatcacccatgtg
ggcgattcgtccttcatgctggaccagcaggtggagcaatggaaattccgggaggagaac
gagcggctcgccagggagggcctgcaggcggctgcagccgagcccctgcttttgggtgtg
accaaggcctccctgtccacggattcctttattgccgccgcctccttccaggagacgacc
aaggtgctgaccaacgccgccatggccggccgggtggatgatctgtccggcctgaaggaa
aacgtaattatgggtcggctgatttcggctggcaccggtctgcggcgctaccgtgtcaac
caaggtgatgagtga
DBGET
integrated database retrieval system
