Desulfuromonas sp. AOP6: AOP6_0319
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Entry
AOP6_0319 CDS
T08366
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOP6_0319 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dep03019
]
AOP6_0319 (recQ)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_0319 (recQ)
Enzymes [BR:
dep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOP6_0319 (recQ)
Messenger RNA biogenesis [BR:
dep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOP6_0319 (recQ)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOP6_0319 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BCA78532
LinkDB
All DBs
Position
328400..330220
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AA seq
606 aa
AA seq
DB search
MNCTPLETLRNVFGYSAFRPYQQPIVDALIAGEDAFVLMPTGGGKSLCYQIPALHRPGVA
IVVSPLISLMKDQVDALRANGVRTAFYNSSLGAPEARQVLAQLHAGDLDLLYVAPERLMS
DGFIERLQCIELALFAIDEAHCVSQWGHDFRPEYVQLGRLRQLFPQVPLIALTATADPQT
RTDILARLGLQRATCYAAGFDRPNIRYTVVEKSRPANQLLTFLQGHEGEAGIVYALSRKR
VEEVAARLCEAGFRAGAYHAGLPDGERQRVQEAFLRDDLQIVVATVAFGMGIDKPNVRFV
VHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAISRGLIEKGGNEEQNRIELHKL
NSMVGFAEPLTCRRRVLLGYFGEKLEEDCGNCDICLNPPQRYDATVDAQKVLSCVYRVGQ
RFGMGHVVDVLRGSGNQRIQTLGHDRLSTYGIGSDKSQESWGSLIRQLVHLGYLKQDVGN
YSVLKLTEAARPLLRGGETLILPLPRVKAKVAKKRLSRKVTDLDYDEGLFEALRVLRKRL
ADEEGVPPFVVFGDQSLAEMAAFRPKDEEALLAINGVGRHKLQRYGAAFLAVIAGEGMDH
SGSTVS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtaccccccttgagacgctgcgcaatgttttcggctacagcgcctttcgcccc
taccagcaacctatcgtcgacgccctgattgccggcgaagacgcctttgtccttatgccc
accggcggcggcaagtctctgtgctatcagattccggctctgcatcgccccggcgtggcc
atcgtggtgtcgccactgatctctctgatgaaagatcaggttgacgccctgcgggccaac
ggggtcaggacggccttctacaactcctcgctcggagcgcccgaagcccggcaggttctg
gcccagctgcatgccggcgacctcgatctcctctatgtcgccccggaacgtctgatgagc
gacggcttcattgagcggctgcagtgtattgagctggccctcttcgccatcgatgaggcc
cactgcgtctcccagtgggggcatgattttcgccccgaatatgtgcagctcggccgtttg
cgccagctcttcccccaggtccctctcattgccctgactgctaccgccgacccccagacc
cgcaccgatatcctggcgcgcctcgggctgcagcgggcgacctgctatgccgccggcttc
gaccggcccaacatccgctataccgtcgtggagaaatcccgtcccgccaaccagctgttg
accttcctgcagggtcatgaaggggaggcaggcatcgtctacgccctctcccgcaagcgg
gtggaagaggtggcggctcgcctgtgcgaagccggctttcgggccggggcctatcacgcc
ggcctgcccgacggcgaacgccagcgggtacaggaggccttcctgcgcgatgacctgcag
attgtcgtcgctaccgtcgccttcggcatgggcatcgacaagccgaacgtgcgcttcgtc
gtccattacgacctgcccaagaatatcgaaagctattatcaggagaccggccgcgccggt
cgcgacggtctgccggcggaagccctgctgctgtttggctatggcgatatcgccatctcc
cgcggtcttatcgaaaagggcggcaacgaggagcagaaccgcatcgagctgcacaaactc
aattccatggtcggcttcgccgaacccctgacctgccggcggcgggtgctgctcggctac
ttcggcgaaaagctggaagaagactgcggcaactgcgacatctgtctcaatcctccccag
cgctacgacgccaccgtcgacgcccagaaagtcctctcctgcgtctaccgggtggggcag
cgcttcggcatggggcatgtggtcgatgttctgcgtggctccggcaaccagcgcatccag
accctcggtcatgaccgcctttccacttacggcatcggcagcgacaaaagccaggagtcc
tgggggagtctcatccgccagctcgttcacctgggctatctgaagcaggacgtgggcaac
tattcggtgctcaagctgaccgaagccgcccgaccgctgctgcgcgggggcgagacgctg
atcctgccgctgccccgcgtgaaggccaaggtggcgaagaagcgcctctcccgcaaagtg
acggacctcgattacgatgaggggctgttcgaagccctgcgcgtgctgcgcaaacgcctg
gccgatgaggagggggtgccgcccttcgtggtcttcggcgaccagagtctggcggagatg
gcggccttccggccaaaggacgaggaggcgctgctcgccatcaacggggtcggccgccac
aagctgcagcgctacggtgccgcttttctggccgttatcgccggagaagggatggaccat
agcggctcgacggtgagctag
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