Desulfuromonas sp. AOP6: AOP6_0482
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Entry
AOP6_0482 CDS
T08366
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dep
Desulfuromonas sp. AOP6
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dep03032
]
AOP6_0482 (topA)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_0482 (topA)
Enzymes [BR:
dep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AOP6_0482 (topA)
DNA replication proteins [BR:
dep03032
]
Prokaryotic type
DNA Topoisomerases
AOP6_0482 (topA)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOP6_0482 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
DNA_ligase_ZBD
DUF5795
Motif
Other DBs
NCBI-ProteinID:
BCA78695
LinkDB
All DBs
Position
complement(508155..510527)
Genome browser
AA seq
790 aa
AA seq
DB search
MSRSLVIVESPAKAKTIEKFLGPGFKVLASYGHVRALPSKQGSVDVEHDFEPLYQVLPES
RKQIDQLKKEVEKSDELILATDLDREGEAIAWHLLKALGIDEASSTPTVKRVTFHEITKD
AIQKAMTEPRTIAKDLVDAQQARSILDYLVGFNLSPFLWKKIRYGLSAGRVQSVALRLIC
EREKEIEAFESREYWTIETRLESKGGQAFAARLFSVDGEKLDKFAISSEAQAKELVSALT
KETCQVCDLVQKQKKRNPAPPFTTSTLQQEASRKLGFSARKTMSTAQKLYEGIDIGEGSV
GLITYMRTDSVALSEVATTEAREVITQLFGKDYALATPRVFKNKAKNAQEAHEAIRPTLV
SNTPDQLKRYLSSDQYRLYHLIWTRTVASQMAAALLDATTVDIAAGSRFVLRATGQVIRF
AGFMKLYIEGTDDAEEAEAGSLPALALGEAVVRREVTPEQHFTQPPARFTEASLVKTLEE
YGIGRPSTYASIMNTLVTRKYVRLEKRTFFVEDVGRVVNDLLVNHFAQYVDYDFTAKLEE
DLDAISRGEEKWRPVLKEFWEPFIALLRQKEQEVSKEDVTTEKTDRTCPECGKELVIKLG
RAGKFYACSGFPECRHTEPLSAEEREEPVMSEEKCDKCGAPMLIKDGRYGKFLACSAYPE
CKNIQPLVKPKALGITCPDCKEGELMEKKSRYGKIFYSCNRYPKCKYALWDQPIDEPCPQ
CGYPVIVEKVTKRYGTYRKCPTENCDYKLVLVEPEKKEKAAPAKKAAAKKPAAKKAPAKK
SPAKKSGKDS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtctctggtgatcgtcgaatcacccgcaaaagcgaaaacgatcgagaagttt
ctcggcccgggcttcaaagtgctggcctcctacggtcacgtgcgcgccctgccaagcaag
caagggtcagtcgatgtggagcacgatttcgaaccgctctaccaggtgctgccggaaagc
cgcaagcagatcgaccagctcaaaaaggaagtcgaaaagagtgacgaactcattctggcc
accgacttggaccgcgagggagaagccatcgcctggcatctgttgaaggcgctgggcatc
gacgaagcatccagtacgcccacggtcaaacgggtgactttccacgaaatcaccaaagac
gccatccagaaggcgatgaccgaaccccgcaccatcgccaaggatctcgtcgacgcccaa
caggcccgctcgatcctggactatctggtcggctttaatctctcccctttcctttggaaa
aaaatccgttacggcctctcggccggacgcgtacagtccgtcgctctgcgcctgatctgc
gaacgggaaaaagagatcgaagccttcgagtcgcgggaatactggaccattgagacccgt
ctcgaatcgaagggcggtcaggctttcgccgcgcgtcttttctccgtggacggcgagaaa
ctcgacaagttcgccatcagcagcgaagctcaggccaaggaactggtcagcgccctgacc
aaggagacctgccaggtctgcgacctggtgcagaaacagaaaaaacgcaatccggccccg
cccttcaccaccagcaccctgcagcaggaagccagtcgaaagctcggcttttccgcccgc
aagaccatgtccactgcccagaaactatatgaaggcatcgacatcggtgaaggctccgtc
ggtctgattacttacatgcgtaccgactccgtcgccctctcggaagtggcgaccaccgaa
gcccgtgaggtcatcacccaacttttcggcaaggactacgctctcgccaccccgagagtt
ttcaagaacaaggccaagaacgcccaggaggcccatgaagccatccgccccaccctggtc
tccaacacccccgaccaactcaagcgctatctgtcctcggaccagtaccgcctctaccat
ctgatctggacgcggacagtcgcctcgcagatggccgccgcccttctcgatgctaccacg
gtggacatcgctgccgggtcacgtttcgtgctgcgggccaccgggcaggtcatccgcttt
gccggcttcatgaagctctatatcgagggcaccgacgacgcggaagaggccgaagccggt
tccctgccggccctggcgctgggtgaggccgtggtacgccgcgaggtgacgcctgaacag
cacttcacccaaccgccggcgcgttttaccgaggcgagcctggtcaagaccctggaggag
tacggcatcggccggccctccacctacgcctccatcatgaacaccctggtcacccgcaag
tacgtgcgcctggaaaaacgcaccttttttgtcgaggatgtcggccgggtggttaacgat
ctgctggttaatcactttgcccagtatgtcgactacgacttcaccgccaagctggaggag
gacctcgacgccatctcccgcggggaagaaaaatggcggcccgtgctcaaggaattctgg
gaacccttcatcgccctgctgcgccagaaagagcaggaggtcagcaaagaggacgtcacc
accgaaaagactgaccgcacctgccccgagtgcggcaaggagctggtcatcaagcttggc
cgggccggtaaattctacgcctgctccggcttccccgagtgccgccacaccgagcccctg
tcggccgaagagcgcgaagagccggtgatgtcggaggagaagtgcgacaagtgcggcgcc
cccatgctcatcaaggacggccgctacggcaaatttctcgcctgcagcgcctaccccgag
tgcaagaacatccagccgctggtcaaacccaaggccctgggcattacctgccccgactgc
aaggagggggaactgatggagaagaagagtcgctacggcaagatcttctactcctgcaac
cgttaccccaagtgcaaatacgccctctgggatcagcccatcgacgagccctgcccccaa
tgcggttatccggtcatcgtcgaaaaggtgaccaaacgctacggtacgtaccgcaaatgc
cccacggagaactgcgattacaagctggtgctggtcgagccggagaagaaggaaaaggcc
gccccggcgaaaaaagcggccgccaagaagcccgccgccaaaaaggctccggccaagaaa
tctccggccaaaaaatcaggcaaagattcctga
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