Desulfuromonas sp. AOP6: AOP6_1311
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Entry
AOP6_1311 CDS
T08366
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOP6_1311 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dep03019
]
AOP6_1311 (pnp)
03016 Transfer RNA biogenesis [BR:
dep03016
]
AOP6_1311 (pnp)
Enzymes [BR:
dep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AOP6_1311 (pnp)
Messenger RNA biogenesis [BR:
dep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AOP6_1311 (pnp)
Transfer RNA biogenesis [BR:
dep03016
]
Prokaryotic type
tRNA degradation factors
AOP6_1311 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
S1_RRP5
DUF4164
Motif
Other DBs
NCBI-ProteinID:
BCA79524
LinkDB
All DBs
Position
1420592..1422688
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AA seq
698 aa
AA seq
DB search
MAYHKVEVEFNGQPLTIETGKMARQADGATVVTYGETQVLCTAVSSTKLREGQDFFPLTV
NYQEKFYAAGKIPGSFFRRERGTTERETLICRLIDRPMRPMFPKGYLFETQIMPTVISAD
RVNDPDTLAIVAASAAVQVSDIPFNGPIAAVRVGRAGGQFVANPTLEQMAQSDLDIIVAG
SRDAVIMVEGESEFLSEDDMLEAIFFGHKAMQPLIDLQAKLGELVGKSKREFQVPQTDED
LAAKVAELAEDKIREAFAIRTKQERYAALAEAKSQVKEALAADFADRLDEIGELFGKIEK
RVVRQMIIKSKVRIDGRDMKTVRPISCEIGNLPRAHGSALFTRGETQALVAVALGTAVDE
QRMDNVQGMEFKKFYLHYNFPPFCVGETSMRLFPGRREIGHGMLAERSISKILPAHTDFP
YTIRIVSDILESNGSSSMASVCGGSLALMDAGVPVKEAVAGIAMGLIKEGDDVAVLSDIL
GDEDHLGDMDFKVTGTRNGVTALQMDIKITGVTRDIMKQALQQAREGRIHILDKMAEAIS
SARGELSPYAPRITTIYVKSDQVRTVIGSGGKTIRSIIEATGCSIDIEDDGRINIASADG
EASQRAVKMIRDLTQEAEVGKLYMGTVRKIMEFGAFVEIFPGTDGLVHISELAKERVRNV
TDVLQEGDQVLVKVLAIDKQGKIKLSRKEALDQTSSAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcacaaagtagaggtagaatttaacggtcaaccccttacaatcgaaacagga
aaaatggcccggcaggctgacggggcaacagttgtcacctatggtgaaacccaggtgctg
tgcaccgcggtttcttcgacgaagctgcgtgagggacaggacttcttcccgctgaccgtg
aactatcaggaaaaattctatgcggccggcaagattccgggctccttttttcgtcgtgag
cgcggtaccaccgagcgtgaaaccctgatctgccgtcttattgaccggcccatgcggcct
atgttccccaagggatatcttttcgaaacgcagatcatgcccacggtgatctccgcggat
cgcgtcaatgaccctgatactctcgctattgtggccgcttcggctgctgtccaggtgtca
gacatccctttcaatggccccattgccgctgtacgcgtgggcagagccggggggcagttc
gtggccaacccgacgctcgaacagatggcgcagagcgatctcgacatcatcgttgccggt
tcccgggacgctgttatcatggtcgaaggtgaatccgagtttctttccgaagatgatatg
ctcgaagcgatcttttttggccataaggccatgcagcctttgattgatcttcaagccaaa
ctgggcgagctcgttggcaagtccaagcgtgagtttcaggttccacagaccgatgaggat
ctggctgccaaagtggcagaattggcggaagacaagattcgcgaggcttttgccattcgc
accaagcaggagcgctatgctgccctggccgaggcaaaatcccaggtcaaggaagccctc
gccgccgacttcgccgatcgccttgacgagattggggagctcttcggcaagattgagaaa
cgcgttgttcgtcagatgattatcaagagcaaggtacgcattgatggtcgcgacatgaaa
acggtgcggccgatctcttgtgagataggcaatctccctcgtgctcacggcagcgccctc
tttacccgcggtgaaacccaggctcttgtggccgtggcactgggaacggccgtcgatgaa
cagcgtatggacaatgtgcagggaatggagtttaaaaagttctacctgcactacaacttt
ccccctttctgcgtgggagagaccagcatgcgtctcttcccgggtcgtcgcgagatcggc
catggcatgctggctgaacgctcgatctccaagattctgcctgctcacacggatttcccc
tataccattcgtatcgtctccgacatccttgagtccaacggctcttcctccatggccagt
gtctgtggcggttccctggctctcatggatgctggtgtgcctgttaaggaggctgtcgcc
ggcatcgccatgggactgatcaaagaaggcgacgatgtggctgtgctcagcgacattctc
ggtgacgaagaccatctcggcgatatggactttaaggttaccggtacccgcaatggggtg
acggccctgcagatggatatcaagatcaccggtgttacccgtgatatcatgaagcaggcc
cttcagcaggcccgtgaaggtcgcatccacatcctcgacaaaatggcggaagccatcagc
tctgctcgtggagaactttctccttacgcccccagaatcaccaccatttatgtcaagtcc
gaccaggtgcgtacggttatcggctcggggggtaaaacaatccgcagcattattgaggca
acaggctgctccatcgatatcgaagatgatggccgcatcaatatcgcttcggctgacggt
gaagccagtcagcgggcggtcaaaatgatccgtgatctcacgcaagaagccgaagtgggc
aagctctatatggggacggtgcgtaaaatcatggaatttggcgccttcgtggaaatattc
cccgggacagatggtctcgtgcatatctccgaactggccaaagagcgcgtccgcaatgtc
accgatgtgcttcaggaaggagaccaggtcctggtcaaggttctggctatcgacaagcaa
gggaagataaagctttcccgcaaagaggcgctcgaccagacttcttcagcggagtag
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