Desulfuromonas sp. AOP6: AOP6_1833
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Entry
AOP6_1833 CDS
T08366
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep02024
Quorum sensing
dep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOP6_1833 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOP6_1833 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dep03019
]
AOP6_1833 (hfq)
03036 Chromosome and associated proteins [BR:
dep03036
]
AOP6_1833 (hfq)
Messenger RNA biogenesis [BR:
dep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AOP6_1833 (hfq)
Chromosome and associated proteins [BR:
dep03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AOP6_1833 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
BCA80046
LinkDB
All DBs
Position
complement(1976807..1977040)
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AA seq
77 aa
AA seq
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MAKTPFNIQDQYLNQARKERVKVIVMMMSGEKLTGYIKSFDSFCLLVESSGDILLYKHAI
SSITSADGAFRLHGGKD
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaccccgttcaatatccaggatcagtacctcaaccaggcccgcaaggagcgg
gtcaaggtaatcgtgatgatgatgtccggcgaaaaactgaccgggtatatcaagtctttc
gacagcttctgtctgcttgttgaaagcagcggtgatattctgctctacaagcatgccatc
agttcgatcacctcagctgacggtgccttccgtctccatgggggcaaggactag
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