Desulfuromonas sp. AOP6: AOP6_1932
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Entry
AOP6_1932 CDS
T08366
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03030
DNA replication
dep03430
Mismatch repair
dep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOP6_1932 (dnaE)
03430 Mismatch repair
AOP6_1932 (dnaE)
03440 Homologous recombination
AOP6_1932 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dep03032
]
AOP6_1932 (dnaE)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_1932 (dnaE)
Enzymes [BR:
dep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOP6_1932 (dnaE)
DNA replication proteins [BR:
dep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOP6_1932 (dnaE)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOP6_1932 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BCA80145
LinkDB
All DBs
Position
complement(2083461..2086934)
Genome browser
AA seq
1157 aa
AA seq
DB search
MEHANFVHLHLHSQYSLLDGAIKIGDLITRAREYKMPALAVTDHGNMFGALEFYSKAAAA
GIKPIVGCEMYVAPGSRFDKSNARGSSEASYHLVLLCQNLTGYRNLCHLVSAAYREGFYY
KPRIDWELLKERNEGLIALTACLGGEIPTLIGMNRMEEAAKRALAMADVFDDNRLFLELQ
ENFLPEQEPVNKGLIQLSQELKLPLVATNDCHYLTREDAYAHEVLLCIQTGKTMDDPNRM
RFSNNEFYVKTPEEMTQLFRHVPEAISNTVAIAERCNLELDFNTYHFPQYEKPQDKTLDE
VLAEDSRQGLDERIADIRKIRPDFSEEEEKTYRVRLERELDCIKQMGFPGYFLIVADFIN
WAKDNSIPVGPGRGSAAGSLVAFAIRITDIDPMPYNLLFERFLNPERISMPDIDVDFCIY
GREDVINYVRQKYGEENVAQIITFGTMMAKGVIRDVGRALNMPYGDVDRIAKLIPGVLNI
TLKDALQQEPKLKELVEKDPKIKELFTIALALEGLTRHASTHAAGVVVTPKPLPEYLPLY
TDPKSGGQVTQFPMSYVEKIGLVKFDFLGLKTLTVIDNAVRLIREGKDPLFDLRIIGDDD
PETYRLLSAGETTGVFQLESSGMKELLVKLKPNCFEDVIAICALYRPGPLGSGMVDDFIQ
RKHGRKAITYDFPQLEAILKDTYGVIVYQEQVMLIAQTLANYSLGGADLLRRAMGKKKPE
EMAKQKDLFLKGAKENKLDPKKAEGVFDLMEKFAAYGFNKSHSAAYALVAYHTAYLKAHY
PVEFMAALLTEDMENTDKVIKNISEVRSMGIEVLPPDINASDRSFTVHGRSIRFGLGAVK
GVGSAALESIIEVRKEAPYSSLHDFCERVDLRKVNKKVVEALIRCGAFDSLGGKRAQYMV
VLEEAMDIGQKVQREKAMGQESLFGVNEIVSHNGNGYGELPAMDEWPEKVLLGFEKESLG
FYITGHPLSRHEDTIRRFATCDTSGLQERPDKSEVRVCGIVAGLKELTTKKGDRMAFVTL
EDLGGFVEMVVFPEVYAASMELLKSEEPLLVSGTLDVGEDTCKLMANEVVSLREVKERQT
KKVHFRVSSPGLEENQLRSLRSIMERHRGECEPFLHLVIPNRSETTIRPIERLKVAANDE
LMDEADKLFGYKVVTFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcaaacttcgttcatctccatttacatagccagtacagtctgctagacggc
gccatcaagatcggcgatctcatcacccgtgcccgcgaatacaagatgcccgccctggcg
gtgaccgatcatggcaacatgtttggagcactggagttctacagcaaggctgccgctgct
ggcatcaaacccattgtcggctgcgagatgtatgtcgccccggggtcgcgtttcgacaag
agcaacgcccgcggttcgtcggaggcgtcttatcacctggtactgctctgccagaatctc
accggctaccgcaatctctgccatctggtctccgctgcctaccgcgaaggtttctattac
aagccgcgcatcgactgggaattgctgaaagagcgcaacgagggtctgatcgctctgact
gcctgtctgggaggagagattcccaccctgatcggcatgaaccgtatggaagaagccgcc
aagcgggcgttggccatggcggacgtcttcgacgacaaccgtctttttctcgaactgcag
gaaaacttcctgcctgagcaggagccggtcaacaaaggccttatccagctctcccaggaa
ctcaagctccccctggtggccaccaacgactgccactacctgacgcgggaagacgcctac
gcccatgaggttctgctgtgcatccagaccggcaagaccatggacgaccccaaccgcatg
cgtttttccaataacgagttttatgtcaagacgccggaggagatgacccagctctttcgc
catgtgccggaggccatcagcaacaccgtggccatcgccgagcgctgcaatctggaactc
gatttcaatacctaccactttccccagtacgaaaagccccaggacaagactctggacgag
gtgctggccgaggactcccgccagggtctcgacgagcgcatcgccgacatccgcaagatc
cgtcccgacttctcggaggaggaggagaagacctatcgcgttcgtctggagcgggagctt
gactgtatcaaacagatgggctttcccggctatttccttatcgtcgccgacttcatcaac
tgggccaaggacaactccatcccggtaggcccggggcgcggcagcgccgccggcagcctg
gtggccttcgccatccgcatcactgacatcgacccgatgccctacaacctgctgttcgag
cgattcctcaatcccgaacgtatctccatgccggatatcgacgtcgacttctgcatctac
ggccgtgaggacgtcatcaactacgtgcgccaaaagtatggcgaagagaacgtggcccag
atcatcaccttcggcaccatgatggccaagggcgttatccgcgacgtcggccgcgccctg
aacatgccttacggcgacgtcgaccgcatcgccaagctcatccccggcgtgctcaatatc
accctcaaggatgctctgcagcaggagcccaagctcaaggaactggtcgaaaaagatccc
aagatcaaggagcttttcaccatcgccctggccctggagggactgacgcgtcacgcttcg
acccacgccgccggcgtcgtggtcactcccaagccgctgcccgagtatctgcccctgtac
accgaccccaaatcgggcgggcaggtgacccagttccccatgagctacgtggagaagatt
ggtctggtcaagttcgacttcctcggcctcaagacccttaccgtcatcgacaacgctgtg
cgtctcatccgcgaaggcaaggaccccctgttcgacctgcgtatcatcggtgacgacgat
cccgagacctaccggttgctctccgccggggaaacaacgggggttttccagcttgaatcc
tcggggatgaaggagttgctggtcaagctcaagcccaactgcttcgaggacgttatcgcc
atctgcgccctctatcgccctggtccgctggggtcggggatggtggacgacttcattcag
cgcaagcacgggcgcaaggccatcacctacgactttccccagttggaggcgatcctcaag
gatacctacggggttatcgtctaccaggagcaggtcatgctcatcgcccagaccctggcc
aactacagcctggggggcgccgacctgctgcggcgggccatgggcaaaaagaagccggag
gagatggccaagcagaaagacctctttctcaagggcgccaaggagaacaaactcgatccg
aagaaggcggaaggggtcttcgacctcatggagaagttcgccgcctacggtttcaacaag
tcgcactcggcggcctatgccctggtggcctatcacaccgcctatctcaaggcccactac
ccggtggagttcatggcagcgctgctgaccgaggacatggagaatacggacaaggtcatc
aagaacatctccgaggtgcgctccatgggcatcgaggtgctgccgcccgatatcaatgcc
tcggatcgctcttttaccgtccatggccgctccatccgtttcggtctcggtgccgtcaag
ggggtcggctcggcggcgctggagtccatcattgaggtgcgcaaggaggcgccctatagc
tccctgcacgatttctgcgagcgggtcgacctgcgcaaggtcaataaaaaggtggtggag
gccctcatccgttgcggcgccttcgactctctgggtggcaagcgcgcccagtacatggtc
gtgctggaagaggccatggatatcggccagaaggtacagcgtgaaaaggccatggggcag
gaatccctcttcggtgtcaacgagatcgtttcccacaacggcaacggttacggcgagctg
ccggccatggacgagtggcccgagaaggtgctcttggggtttgaaaaagaatctctcggc
ttctacatcaccggacatcccctgtcccgccatgaagataccatccgccgttttgccacc
tgcgacacctcggggctgcaggagcgccctgacaagtcggaggtcagggtctgcggcatt
gtcgccggtcttaaggaactgaccactaaaaaaggcgaccgcatggcttttgtcaccctg
gaggacctgggtggctttgtagagatggtggtctttcccgaggtctacgcggcctccatg
gagctactcaagtcggaagagccgctgctggtcagtgggactctggacgttggcgaggat
acctgcaaactgatggccaatgaagtggtttcgctgcgcgaggtcaaggagcggcagacg
aagaaggtacattttcgcgtcagcagtcccggtctggaggaaaaccagttgcgctcgttg
cgcagtatcatggagcgccatcgcggtgaatgcgagccgttcctccatctggtgattccc
aaccgcagtgaaacaaccatccgtcccattgagcgtcttaaagtggccgccaacgacgaa
ttgatggacgaagccgacaagcttttcggctacaaggtggtcactttcgagtag
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