Desulfuromonas sp. AOP6: AOP6_2161
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Entry
AOP6_2161 CDS
T08366
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03030
DNA replication
dep03410
Base excision repair
dep03420
Nucleotide excision repair
dep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOP6_2161 (polA)
03410 Base excision repair
AOP6_2161 (polA)
03420 Nucleotide excision repair
AOP6_2161 (polA)
03440 Homologous recombination
AOP6_2161 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dep03032
]
AOP6_2161 (polA)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_2161 (polA)
Enzymes [BR:
dep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOP6_2161 (polA)
DNA replication proteins [BR:
dep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOP6_2161 (polA)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOP6_2161 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOP6_2161 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
NYN_YacP
Enkurin
Motif
Other DBs
NCBI-ProteinID:
BCA80374
LinkDB
All DBs
Position
complement(2344474..2347146)
Genome browser
AA seq
890 aa
AA seq
DB search
MTSPAKRLYLIDGSSYIYRAYFAIRHLSNSKGFATNAVYGFINMLLKVVREEEPDHLAVV
FDAPGPTFRKEIYDAYKANRAKMPEDLVPQIPVIKEVVRAFNMPAIEKEGFEADDIIATL
ARRFAAEGMDVTVVTGDKDLMQIVNDRVRLLDTMKDKVSGPAEVLERFGGSPEKVIEVQA
LAGDSSDNVPGVPGIGEKTAVKLIQEFGSVEELLARVDEVKGKMQEKLREFGEQALLSKK
LVTLVDDVPLAVDYDNFSLSEPNRQALTAIFKEMEFHKLIQEFSTENRATGENYHGVLDE
KALDALVARLKKAPRFAFDTETTSLTAVQADLVGLSFAIEPEEAWYIPVGHRYLGAPEQL
ARDRVLDKLRPLLEDAHLGKIGQNIKYDALVLRRAGVQVKGIAFDTMLASYLTNPASKSH
GMDALASELLGHKTISYKEMTGSGKKQIGFDEVEVEKAIVYAAEDADITLRLAEVLEPKL
QETEQETLFRDVEMPLVEVLTDMEWTGIRIDTGFLERLSAEMEKKLAALEKEIFELAGGS
FNIGSPKQLGEVLFERLGLPKGKKTKTGWSTDVEVLNKLAEDHPVAAKILDYRSLAKLKG
TYADALPKLVNPETGRIHTSFNQAVTATGRLSSSDPNLQNIPIRTEEGSRLREAFIPAEG
NLLISADYSQIELRVLAHMADEAVLQESFAQGEDIHRRTASEVFGVFPEMVTAEMRRQAK
TINFGVIYGMGAFSLGKDLGIPTREAQTFIDNYFARYPGIKAFMEGKKEEAREKLYVSTL
LGRRCAVPEINSKNGAIRSYAERNAINYPIQGSAADIVKIAMIRIHERLRKEGLQTAMVL
QVHDELVFDVPEQEVERVKCLVREEMEGAVTLKVPLLVELGVGKNWRQAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaccagccaagcgactttatctcatcgatggctcatcctacatctaccgggcc
tattttgccatccggcatctgtccaattccaaaggttttgccaccaacgccgtctacggc
ttcatcaatatgctgctcaaggtagtgcgggaggaggagcccgatcatctggccgtggtc
ttcgatgcccccggcccgacctttcgcaaggagatctacgatgcgtacaaggcgaaccgg
gccaagatgcccgaagatctggtgccgcagattccggtgatcaaggaggtggtgcgggcc
ttcaacatgccggccatcgaaaaggaggggttcgaggcggacgatatcatcgccacgctg
gcgcggcgctttgccgccgaggggatggacgttaccgtggtcacgggcgacaaggatctc
atgcagatcgtcaatgatcgggtgcgtctgctcgacaccatgaaggacaaggtctccggc
ccggccgaggtgctggagcgtttcggcggttcgccggaaaaggtaatcgaggtgcaggcc
ctggccggcgacagttcggacaacgttcccggtgtgcccggcatcggcgagaagacggcg
gtaaaactgatccaggagttcggctccgtcgaagagctgctggcccgggtcgacgaagtc
aaagggaagatgcaggaaaaactgcgcgaatttggcgaacaggcgctgctgtccaaaaag
ctggtgaccctggttgatgacgtgcctctcgcggtggattatgacaatttttctctttcc
gagcccaaccggcaggccctgaccgccatctttaaagagatggagttccacaagctgatt
caggagttctccaccgaaaaccgcgccactggggaaaactaccatggtgtgctggatgaa
aaggcgctcgatgctctcgttgcccgcctgaaaaaggctccccgcttcgccttcgatacg
gagacgaccagtctgaccgctgtgcaggcggacctggtcggcctgtcctttgccatcgaa
ccggaagaggcctggtatatcccggtgggccatcgttatctgggggcacctgaacagctg
gcgcgggaccgggtgctggacaagctgcggcccctgctggaagatgcgcaccttggcaag
atcggccagaacatcaagtacgatgcgctggtgctgcggcgggccggcgtgcaggtcaag
gggatcgccttcgataccatgctggcctcctacctcaccaatccggcctccaagagccac
ggcatggatgccctggccagtgaactgctcggtcataagaccatcagctacaaggagatg
accggcagcggcaagaagcagatcggttttgacgaggtcgaggtggaaaaggctattgtg
tacgcagccgaggatgcggatatcaccttgcgtctggccgaagtcctggagccgaagctg
caggaaacggagcaggagacgctctttcgtgacgtggagatgccgctggtcgaggtgctg
accgacatggagtggaccgggatacgcatcgacacgggttttctggaacgtctctccgcc
gagatggaaaagaagctggcagcccttgaaaaggagattttcgagctggccggcggttct
ttcaatatcgggtcgcccaagcagcttggcgaggtgcttttcgagcgtctcggcttgccc
aaggggaagaagaccaagacgggctggtcgacggacgtggaggtcctcaataagttggcc
gaggaccatccggtggcggcgaagattctcgactaccgctcgctggccaagctcaaggga
acctacgccgatgccctacccaaactggtcaacccggagacgggacgcattcacacctcc
ttcaatcaggccgtgaccgcgacgggtcgactttcctccagcgatcccaatctgcagaac
atccccatccgcacggaggaggggagccgtctccgtgaagccttcatcccggctgagggc
aatctgctgatttccgctgactattcccagatcgagctgagggtgctggctcacatggcc
gacgaggcggtgctgcaggagagctttgcccaaggggaggatatccatcgccgtacggcc
agcgaggtcttcggggttttccccgagatggtgacggcggaaatgcggcggcaggccaaa
accatcaattttggcgtcatttacgggatgggcgctttcagcctcggcaaagacctgggt
attcccacccgcgaggcccagaccttcatcgacaattacttcgcccgctatcctggcatc
aaggccttcatggaggggaagaaggaggaggcccgcgagaaactctatgtttccactctg
ctgggtcgccgctgcgccgtgcccgaaatcaatagtaaaaacggtgccatccggagctac
gctgaacgcaacgcgatcaattatccgatccaggggtcggcagccgatattgtcaagatc
gccatgatccgcattcacgagcgcctgcgtaaggagggtctgcagacggccatggtgctg
caggtacatgacgaactggtcttcgatgtgccggagcaggaagtggaacgggtcaagtgt
ctggtgcgggaagagatggaaggtgctgtcacgctcaaggtgccgctgcttgtcgagctc
ggtgtaggcaaaaactggcggcaggctcactaa
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