Desulfuromonas sp. AOP6: AOP6_2225
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Entry
AOP6_2225 CDS
T08366
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOP6_2225 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dep03021
]
AOP6_2225 (rpoA)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_2225 (rpoA)
Enzymes [BR:
dep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOP6_2225 (rpoA)
Transcription machinery [BR:
dep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOP6_2225 (rpoA)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOP6_2225 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
BCA80438
LinkDB
All DBs
Position
complement(2408897..2409913)
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AA seq
338 aa
AA seq
DB search
MYKNWRDLIKPKRLQIESDSLTDTYGKFYAEPFERGFATTLGNSLRRILLSSLQGAAITS
VRIKGVLHEFSTVPGVTEDVTDIILNLKGVLLKLHGSESRNIRIVKKGAGIITAGDIITD
SQVEVLNPEHHIATCSKEADVEMDMVVALGKGYVPAERNRDERAPVGTIPIDSIFSPIKK
VNFTVANARVGQITDFDKLSLEVLTDGCVRPDDAVAYAAKILKEQLQIFINFDENLEPAA
QEVAEEGRKINENLYRSVDELELSVRSANCLKNANIHLIGDLVQRSEAEMLKTQNFGRKS
LNEIKDILAEMDLTLGMKLDNFPDPEYLKMIQKGSEEE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactggagagatctcatcaagcctaagcgcctccagattgagtcggacagt
ctgaccgatacctatgggaagttttatgcggaacctttcgagcgtggtttcgcaaccact
ctcgggaattctttgcgtcgcattctgctctcgtctttgcagggggcggctatcacctcg
gttcgtatcaagggggttctgcatgaattctcgactgttcctggggtgacggaagacgta
accgatattattctcaatctcaagggagttcttctgaagcttcatgggagtgagagtcgg
aatatccgcattgtaaaaaaaggggctggtatcattactgctggtgatatcatcactgat
tctcaggtcgaggtgctcaatccagaacatcacattgcaacctgttccaaagaggctgac
gtggagatggatatggtggtcgctctgggtaagggttatgttccggccgaacgcaatcgt
gacgagcgggctcccgtgggaactattcccattgactcaattttttcaccgatcaaaaag
gtaaactttacggtggccaacgccagggtcgggcagatcaccgacttcgacaagctttct
ctggaagttctgaccgatggatgtgtgaggcctgatgacgccgtggcctatgctgctaaa
atcttgaaagagcagttgcagattttcataaacttcgacgaaaatctggagcccgctgct
caggaggtcgctgaagagggacggaaaatcaacgaaaatctctatcgcagcgtcgatgag
cttgagttgtccgttcgaagcgccaactgccttaagaatgccaatattcatcttattggt
gacctggtacagcgcagtgaggcggaaatgcttaaaacccaaaatttcggcagaaaatct
ctgaatgaaatcaaggatattttagccgaaatggacttgaccctgggcatgaaactcgac
aatttcccggatcctgaatacctcaaaatgatccaaaaggggagcgaagaagaatag
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