Desulfuromonas sp. AOP6: AOP6_2526
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Entry
AOP6_2526 CDS
T08366
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03420
Nucleotide excision repair
dep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOP6_2526 (pcrA)
03430 Mismatch repair
AOP6_2526 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_2526 (pcrA)
Enzymes [BR:
dep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOP6_2526 (pcrA)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOP6_2526 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AOP6_2526 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
AAA_12
AAA_22
DEAD
Sp-DndD
Motif
Other DBs
NCBI-ProteinID:
BCA80739
LinkDB
All DBs
Position
complement(2718392..2720587)
Genome browser
AA seq
731 aa
AA seq
DB search
MIDLLTGLNAPQRQAVEQTEGPLLILAGAGSGKTRTLIHRIAYLLREKKVAPWEILAVTF
TNKAAAEMKERLERLLGQEELPWVATFHATCVRILRREIAALGFTTNFTIYDDQDQLRLL
KDILKELHIPEKVAKERAAATFIDQCKNRGLFPAELEGQDSRDEALIRVYELYQRKMKQA
NALDFGDLILYTIALFEKHPEVLDRYRRRFRYILVDEFQDTNQVQYRLVKLLASGYGNLC
VVGDDDQSIYAWRGAEISNILGFDRDFPGTQVIRLEQNYRSTNTVLEAAGHVVARNVGRK
GKTLWTENPAGEKITLEALADDLEEARYVAAEISRLKKSGRPLRDVAVFYRTNVQSRALE
EALRGQGLPYVMFGGLKFYSRMEIKDILAYLRVLVNPADSVSARRIINVPARGIGAATVE
RIGQFEEEAGGFLPACREALDRGAIRGAAAKRVGDFVTLMEDYRGRIEQTPYPALTASLI
DDSGYGPMLRDERTEESRGRLENLEQLLAGMEEHYGSEGTLQEYLEQVALITDLDSYDPS
LDRITLMTLHAAKGLEFPVVFMTGMEEGLFPHSRMGSDDGDVEEERRLCYVGMTRAMEKL
YLTHARRRRVYGSFQFNPPSRFLEEIPASLLVGTDTPSLKKPAQHNLASIFEQVEPAPFA
GDDEDFFEEEVRVVPEAEEGLRIGIRVRHVKFGVGTVRRLEGSGDNQKVIVYFNTVGPKK
LLLKFAGLEPA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctgctgaccgggctcaacgccccgcagcgacaggcggtggagcagaccgag
ggtcctctgcttattctggccggggccggctcaggtaagacgcgcaccctcattcatcgc
atcgcgtacctgctgcgtgaaaaaaaggtcgccccctgggagatcctcgccgtcactttc
accaacaaggccgccgccgaaatgaaggagcgtctggagcgtctgcttgggcaggaggaa
ctcccctgggtcgctaccttccacgccacctgtgtgcgtatcctgcgccgggagattgcc
gccctggggtttaccaccaatttcaccatatacgatgatcaggatcagctgcgcctgctc
aaggacatcctcaaggagttgcatatccctgaaaaggtggccaaggaacgcgccgccgcc
accttcatcgaccagtgcaaaaaccgggggctttttccggccgagctggaggggcaggat
tcccgcgacgaggccctgatccgggtctatgagctgtaccagaggaagatgaagcaagcc
aacgccctggacttcggcgatctcatcctctacaccatcgccctgttcgagaagcatccc
gaggtgctcgatcgctaccgccgccgttttcgctacatcctggtggacgagttccaggac
accaatcaggtccagtaccggctggtgaagctcctcgcctcggggtacggcaacctgtgc
gtggtcggcgacgacgaccagtccatctacgcctggcgtggtgccgagatcagcaatatc
cttggtttcgaccgggattttcccggcacccaggtcatccgtctggagcagaactaccgc
tccacgaacaccgtcctggaggcggccggccatgtggtcgcccgcaacgtcggccgcaag
ggcaagaccctgtggacggaaaacccggccggggaaaagatcaccctggaggccttggcc
gacgatctggaggaagcgcgctatgtcgccgcagaaatttcccgcctgaagaagtccggg
cgccctctgcgtgacgtcgctgttttttaccgtaccaacgttcagtcccgtgccttggag
gaagccctgcgcgggcaggggctgccctacgtcatgttcggcggccttaaattctacagc
cgtatggaaatcaaggatatcctggcctatctgcgggtactcgtcaatccggccgattcg
gtctcggcccggcgtattatcaatgtgccggcccggggcatcggcgccgccaccgtcgag
cggatcggccagtttgaagaagaggccggcggctttctgcccgcctgccgtgaggcgctg
gaccgtggcgcgatccggggggccgccgctaaaagggtcggtgatttcgtcaccctcatg
gaggattaccgtggccgcatcgagcagacaccttatcccgccctgacggcgtcgctcatc
gatgacagcggctacggaccgatgctgcgcgacgagcgcacggaggagtcgcggggacgc
ctggagaacctggagcagctgctggccggcatggaggagcattacggctcggaaggtact
ctgcaggaatacctggagcaggtcgctctcatcaccgatctcgactcctacgatcccagc
ctcgaccgtatcaccctcatgaccctgcatgctgccaagggccttgaattccccgtggtg
ttcatgaccggcatggaagaggggctcttcccccactcccgtatgggatccgacgacggc
gacgtggaagaagagcgccgactctgttacgtggggatgacccgggccatggagaagctc
tatctgacccatgcccgccgccgccgggtctacggcagctttcagttcaacccgcccagc
cgctttctggaagaaattcccgcctcgctactggtaggcaccgatacgccttcgctgaaa
aagccggctcagcataatctggcttccattttcgagcaggtggaaccggccccttttgcc
ggcgatgatgaggattttttcgaggaggaggtgcgcgttgttcccgaggccgaagagggg
ctgcgcatcggcattcgcgttcgtcatgtcaaattcggcgtcggcacggtacggcgcctg
gaggggagcggcgacaaccagaaggtcatcgtctatttcaatacggtggggcctaaaaag
ctcctgctcaaattcgccgggctggagccggcctga
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