Desulfuromonas sp. AOP6: AOP6_2688
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Entry
AOP6_2688 CDS
T08366
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03030
DNA replication
dep03430
Mismatch repair
dep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOP6_2688 (dnaX)
03430 Mismatch repair
AOP6_2688 (dnaX)
03440 Homologous recombination
AOP6_2688 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dep03032
]
AOP6_2688 (dnaX)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_2688 (dnaX)
Enzymes [BR:
dep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOP6_2688 (dnaX)
DNA replication proteins [BR:
dep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOP6_2688 (dnaX)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOP6_2688 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_30
TIP49
AAA_2
AAA_19
AAA_14
Mg_chelatase
AAA_18
nSTAND3
TsaE
DUF815
DUF3646
AAA_28
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
BCA80901
LinkDB
All DBs
Position
complement(2902604..2904268)
Genome browser
AA seq
554 aa
AA seq
DB search
MSYLVLARKWRPQSFSDLVGQEHVSRTLANAIHSGRVHHAFLFTGARGVGKTSAARILAK
ALNCAEGPTETPCNQCPSCVEITSGQGVDVLEIDGASNTGVDDIRALRENIRYLPSRSRY
KIFIIDEVHMLSINAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKISQ
PKVAERLREIVDAEGIGMSDKALGLVARQGEGSMRDSLSALDQIVAFCGMEVADQDVLGI
LGMVDRRLLMDAVSGVLGRDGHRVLEVVRQVDNLGHSFRQFCQELVETLRSLVLIAVVEE
PGELLQVTSSELQELRGLAGDCELEELQRILTILIRTEAELATAAYPKLILEMALVRLAH
MPQVKSVAALVRKIEDLERLLASGLPQTPPRPTPEKPERPAPVPEELPKKAEAPAPQASA
PGGWQGLVEHVRARRPLIATLLENGSLLRLELPVLEIGYVAASFMFEQVRDPETLEVITT
LASEYFAQPVTIKLSPVAGEKKAPPSLVQERQAQESDRKNRLRNDALAHPMIKAAVEIFE
GKVSEVKPIDKGFV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacctggtactggctcgcaaatggcgaccccagagcttttctgacctggttggg
caggagcatgtcagtcgcactctggccaacgccatacattccggccgcgttcatcatgct
tttctgtttactggcgcccgcggtgttggcaaaacctcggctgcgcgcattttggccaag
gcgctcaactgcgctgaggggccgactgaaactccctgcaaccagtgtccttcctgtgtc
gaaatcaccagcggacagggtgtcgatgttttggaaatcgacggggcctccaatacgggc
gtcgacgatattcgcgccctgcgcgaaaatatccgctacctgccttctcgctcccgctac
aagattttcatcatcgacgaagtccacatgctctccatcaatgcttttaacgccctgttg
aaaacgcttgaagagccgcccgagcatgccaagttcatctttgccacgaccgaaccccat
aaaatacccattaccattctctcccgctgccagcgtttcgattttcggaaaatctctcag
ccgaaagtggctgagcgcctgcgcgagattgtcgacgcggaggggatcgggatgtcagac
aaggctctcgggctggtggcgcgccagggggaaggcagcatgcgtgattcgctgtcggct
ctcgatcagattgtcgccttttgtggcatggaggtagcagaccaggatgttctcgggatt
ctcggcatggtcgaccgccgtcttcttatggatgcggtctcgggcgtgctgggccgggat
ggccaccgggttctcgaagttgtccggcaggtggacaatctgggccattcttttcggcaa
ttctgtcaggagctggtggagactctccgatccctggtgcttatcgcggtggttgaggag
cctggtgagctcttgcaggtgacttccagcgaactgcaggaactccgggggctggctgga
gattgcgaacttgaagagctgcagcgtattctgaccattctcatccgcaccgaagcggag
ctggccacggcggcttatcccaagttgatcctagagatggccctggttcgtctggctcac
atgccgcaggtcaagagcgtggcagccctggtacgcaagatcgaggaccttgagcgtctg
cttgccagcggactgccacaaacccctccccgaccgactcctgagaagccagagcgccca
gcgccggttccggaggagttgccaaaaaaggctgaagccccggctcctcaggcctcagcg
ccgggagggtggcaggggctggttgagcatgtccgtgcccgtcgccccctgatcgcgact
ctgcttgaaaatggcagcctcctgcgcctggagcttcccgttcttgaaatcggctatgtg
gccgcctccttcatgtttgaacaggtccgtgatccggaaacgcttgaggtgatcacgacc
cttgccagtgaatatttcgcccaacctgtcaccatcaaactatcccccgttgccggcgaa
aaaaaggcaccaccctctttggttcaggagcgtcaggctcaggaatccgaccgcaaaaac
cgtctgcgcaacgacgctctggcgcaccccatgatcaaggcggctgttgagatcttcgaa
ggcaaggtcagcgaggtaaagcccatcgataagggttttgtgtag
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