Devosia sp. H5989: XM25_02280
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Entry
XM25_02280 CDS
T04003
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_02280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_02280
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MGS
Motif
Other DBs
NCBI-ProteinID:
AKR54648
LinkDB
All DBs
Position
454361..455932
Genome browser
AA seq
523 aa
AA seq
DB search
MLAGSAAFAVMGAFPAFAQQKGGKLTVGLTYEIDTMNVYSTGFLGDAQAAVVEGLLAPDE
HAKYVPVLATEVPTLENGGIVVSEDGKTMKITYKLRPGVKWHDGAPFTSADVKYTWEAVK
DPAFIAESKDGSSEVESIDTPDDLTVVVNYNTILPTFASTLFTFGIMPKHLLEGTDLNTS
SYNETPVGTGPFKVTEFVRGQYVVTERFEDYWRKADNGDQLPYLDGIIFKMIPDTNTLIT
QLKSGEVQLVVQTPYNQAAQVEGIDGIELVKGPLLSWQHLDFNFKRPSLADINVRKAIAS
AIDRSILIKAQGGFPEAIKSPVVPVFDFYDPNTPETAYDVEAAKKLLDDAGYKPGGDGIR
EKDGERLSYTFMVQAGRADDELAQQVIIAQLKAIGIEATADNKTGVAYREARYKGGYDLI
YGRWITSADPVYSVFWGTGGANNGQSYSNPALDAAFGKFENTLDPAVRKEAAAEFQKILA
EDLPTISLTTNVALIAKTEKLKNFVPNPTNMTNFVNSSPWYLE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccggttcggctgcttttgcggtgatgggggccttcccggccttcgcccagcag
aagggcggcaagctgactgtcggtctcacctatgaaatcgacaccatgaacgtctattcc
accggcttcctgggcgacgcccaggccgcggtggtcgaagggctgctggcgcccgacgag
cacgccaagtacgtgccggtcctcgccaccgaagtgcccaccctcgagaacggcggcatc
gtcgtctccgaggacggcaagaccatgaagatcacctacaagctgcgcccgggcgtcaag
tggcacgacggcgcgcccttcacctccgccgacgtcaagtacacctgggaagcggtcaag
gatccggccttcatcgccgagtccaaggatggctcgtccgaggtcgagagcatcgacact
cccgacgacctgacggtcgtggtgaactacaacaccatcctgccgaccttcgcctccacg
ctcttcaccttcggcatcatgcccaagcacctgctcgaaggcaccgatctgaacacctcg
tcctacaacgagactccggtcggcaccggtcccttcaaggtcaccgaattcgttcgtggc
cagtatgtggtgaccgagcgcttcgaggactattggcgcaaggccgacaacggcgatcag
ctgccctacctggacggcatcatcttcaagatgatcccggacaccaacacgctcatcacc
cagctcaagtccggtgaagtgcagctcgtcgttcagaccccctacaaccaggccgcccag
gtcgaggggatcgacggcatcgaactggtcaaggggccgctgctgtcctggcagcacctg
gacttcaacttcaagcgtccgtcgctcgccgacatcaatgtccgcaaggccatcgcgtcc
gcgatcgatcgctccatcctgatcaaggcgcagggcggcttccccgaggccatcaagtcc
ccggtcgtgccggtgttcgacttctacgacccgaacacgcccgaaaccgcctatgacgtc
gaagccgccaagaagctgctcgacgacgccggctacaagcccggtggcgacggcatccgc
gagaaggacggcgagcggctctcctacaccttcatggtgcaggccggccgtgccgatgac
gaacttgcccagcaggtcatcatcgcccagctcaaggccatcggcatcgaggctaccgcc
gacaacaagaccggcgtcgcttatcgcgaagcccgctacaagggcggctacgacctgatc
tacggtcgctggatcacctcggccgacccggtctactcggtgttctggggcaccggtggc
gccaacaacggccagtcctactccaacccggcgctcgacgcggcattcggcaagttcgag
aacactctcgatccggccgtgcgcaaggaggctgcggccgagttccagaagatcctggcc
gaggacctgcccaccatctccctgaccaccaacgtggccctgatcgccaagaccgagaag
ctgaagaacttcgtcccgaacccgaccaacatgacgaacttcgtcaactccagcccctgg
tatctcgaatag
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