Devosia sp. H5989: XM25_03220
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Entry
XM25_03220 CDS
T04003
Symbol
CbbR
Name
(GenBank) RuBisCO operon transcriptional regulator CbbR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
deq03000
]
XM25_03220 (CbbR)
Transcription factors [BR:
deq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
XM25_03220 (CbbR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
WASH_WAHD
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AKR54826
LinkDB
All DBs
Position
complement(651042..651962)
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AA seq
306 aa
AA seq
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MKNITLRQLRAVAAVQKAGKIIFAANELGLSQPAVTLQLRDLEAMLGTQLFDRTSEGMRP
TAAGLAVAEAAKAIEERLLVLHDEIDAIKGVRKGALRLGVVSTAKYFAPGIMAAFMKQYP
DVDVSLFVGNRAETIASLNNHSVDVALMGRPPRELPVRAASFGEHPLVFVAPPDHPLARH
KQISKERIGQEKFLVRERGSGTRISLEIFLGELPGRIDDLGTELDSNETIKQAVMAGLGL
AFISGHTIAQEVELGRLVVLDVLGTPIRRQWFSVTRADRALSPSMVAFEAFLGKEGERFL
PRITAR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatcaccctacgccagctccgcgccgtggccgccgtgcagaaggctggcaaa
atcatatttgctgccaacgagttaggtttgtcgcagccggcggtaacgctgcagttgcgg
gacctggaggcgatgctgggaacgcagctcttcgaccgcaccagcgaggggatgcgtccg
actgccgcagggctggcggtggccgaggccgccaaggccatcgaggaacggctgctggtg
ctccatgacgagatcgacgccatcaagggcgtgcgcaagggggcgctgcggctgggggtg
gtatcgacggccaagtatttcgctcccggaatcatggccgcgttcatgaagcagtatccg
gacgtggacgtgtcgctgttcgtgggcaatcgcgccgagaccatagcgagcctcaacaac
cactcggtggacgtggcgctgatggggcggcccccgcgcgagttgccggtacgtgcggct
tcgttcggcgagcatccgctggttttcgtggcgccgcccgaccatccgctggccaggcac
aagcagatcagcaaggagcgcatcgggcaggagaagttcctggtgcgcgagcgcggctcg
gggacgcgcatctcgctcgagatctttctgggcgaactccctgggcggatcgacgacttg
ggaaccgaactcgactccaacgaaaccatcaagcaggcagtgatggcggggctgggactg
gccttcatttccggccataccatcgcccaggaagtggagctggggcggctcgtggtgctc
gacgtgctgggaacaccgatccggcggcaatggttctcggtcacgcgggccgaccgggcg
ctttcgccgagcatggtggccttcgaggcgttcctgggcaaggaaggcgaacggttcctg
cccaggatcaccgcaaggtga
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