Devosia sp. H5989: XM25_03640
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Entry
XM25_03640 CDS
T04003
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NAD(P)+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
deq
Devosia sp. H5989
Pathway
deq00250
Alanine, aspartate and glutamate metabolism
deq00310
Lysine degradation
deq00350
Tyrosine metabolism
deq00650
Butanoate metabolism
deq00760
Nicotinate and nicotinamide metabolism
deq01100
Metabolic pathways
deq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XM25_03640 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XM25_03640 (gabD)
00310 Lysine degradation
XM25_03640 (gabD)
00350 Tyrosine metabolism
XM25_03640 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
XM25_03640 (gabD)
Enzymes [BR:
deq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
XM25_03640 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
XM25_03640 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
XM25_03640 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AKR54910
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Position
complement(739487..740944)
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AA seq
485 aa
AA seq
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MKLKDPTLLRQAAYVAGKWIEATPGQSIAVTNPATGERVGNVPRLGTAATREAIEAAREA
QVEWAARTAKERSVILRRWFELMMANQDDLGLILTLEQGKPLAEAKGEIAYGASFIEWFA
EEARRVYGDIIPGHQRDKRIMVLKQPIGVVGAITPWNFPNAMITRKAGPALAAGCAMVLK
PASQTPFSAIALAVLAERAGIPAGVFSVLTGSASEIGAEMTANPIVRKITFTGSTEIGAQ
LFAQSAPTIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQEG
VYDAFAQKLSAAVSKLKVGNGLDEGVVLGPLIDDKAVAKVEEHIADAVDKGAHVALGGKP
HALGGTFFETTILTGVTPQMAVAREETFGPLAPLFAFKDEADVIAQANDTEFGLASYFYA
RDLARVWRVAEALEYGMVGVNTGLISTAEAPFGGVKSSGLGREGSKYGIEEFTEIKYVCL
GGIGA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaggatcccacgcttctccgccaggctgcctatgtcgccggcaagtggatc
gaagccacgcccggccagtccatcgccgtaaccaaccccgccaccggtgaacgggttggc
aatgtccccaggctggggacggccgcgacccgcgaggccatcgaggccgcgcgcgaagcg
caggtcgaatgggcggcgcggaccgccaaggagcgctccgtcatcctgcgccgctggttc
gagctgatgatggccaaccaggacgacttgggcctcatcctgacgctcgaacaaggcaag
cctcttgccgaggccaagggcgagatcgcctatggcgccagcttcatcgaatggttcgca
gaagaagcccgccgggtctatggcgacatcatccccgggcaccagcgcgacaaacgcatc
atggtgctcaagcagcccattggagtggtcggcgcgatcacgccctggaacttccccaac
gccatgatcacgcgcaaggccgggcccgcgctggccgccggctgcgccatggtgctcaag
cccgcctcgcagacgccgttttcggccatcgcgctggccgttctcgccgagcgcgcgggc
attcccgcgggggtgttcagcgtccttaccggttcggcctccgagatcggcgccgagatg
actgccaatccgatcgtgcgcaagatcacgttcaccggctcgaccgagatcggcgcgcag
ctctttgcgcagagcgcgccgactatcaagaagctcgggctggagctgggcggcaatgcg
cccttcatcgtctttgacgacgcggacctcgatgccgccgtcgaaggcgccctgatcgcc
aagttccgcaacaacgggcagacctgcgtgtgcgccaaccgcatctacgtgcaggaaggg
gtctacgacgccttcgcccagaagctctcggcagcggtcagcaagctcaaggtcggcaat
ggcctcgatgaaggcgtggtgctcgggccgctgatcgacgacaaggcggtagccaaggtc
gaagaacatatcgccgatgccgtggacaagggtgcgcacgtggcgctgggcggcaagccg
catgcgctgggcggcaccttctttgaaaccaccatcctcaccggcgtgacgccgcagatg
gcggtggcgcgcgaggaaaccttcggccccctggctccgctcttcgccttcaaggacgag
gccgacgtcattgcacaggccaacgataccgagttcggcctcgcgtcctatttctatgcg
cgcgacctcgcgcgcgtctggcgggtggccgaggcgctcgaatacggcatggtcggggtc
aacaccggcctcatctccaccgccgaagcgccgttcggcggcgtcaaatcctcgggcctg
ggccgggaaggctccaaatacggcatcgaggagttcaccgagatcaaatatgtctgcctc
ggcggtatcggggcctaa
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