Devosia sp. H5989: XM25_03965
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Entry
XM25_03965 CDS
T04003
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_03965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_03965
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_03965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IpaB_EvcA
SAP130_C
Motif
Other DBs
NCBI-ProteinID:
AKR54976
LinkDB
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Position
823972..825507
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AA seq
511 aa
AA seq
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MVETMTFWQSQKKLLAGVALATVVGALAISAPVQAATLRMAWAQDATGLDPHKQTAFSSL
RLLELIYEPLVRLDANLNIVPAIADSWEFSADGTSLTFKLNPNAKFHNGEAVTSADVKAS
FERILDEATGAATRANFLSISSIETPDAGTVVFKLSQPDAPILTAMTDLNAAIVPASEIA
AGTIGTKAIGSGPFKLDQWEPNSKEVLSTNKDWAGGAVPLDGINISVLPDETAILAALRT
GQVDFALLNDPLVATLVPREANLQLNRQPGLAYNVLQLNPSRSPMTELGVRQAISCAIDR
QEVLDTALLGEGQVTGPLTIPAYATAPKELFCYTPDLEKARKLMADAGHADGFEATVIAA
TGEPPVAASEAQVIQSQLAEIGIKLNIETMELNVYVDRWLKGDFDMAVAQNGGRADPYTM
YNRYWTKDGNLQKVSNYIDDTLDSLMKQGRTETDPAKRKEIFAQFEKHLAEVSPWIWLST
SYNYTAQQKTVHGFVPTPTGTLFGLTKVTLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaacaatgacgttttggcaatcgcagaagaagttgctggcgggcgtagcgctg
gccacggtcgttggggcgcttgcgatttcggcgccggtccaggctgccacgctgcgcatg
gcatgggcacaggacgccaccgggctggacccgcacaagcagacggcgttttcctcgctg
cgcctgctcgagctcatctatgagccgctggtccggctggacgccaacctcaatatcgtt
ccggccatcgccgactcctgggagttcagcgccgacggcaccagcctgacgttcaagctc
aacccgaacgccaagttccacaatggcgaggcggtgacctccgccgacgtcaaggcgagc
ttcgagcgcatccttgatgaagccaccggcgccgccacgcgcgccaacttcctctcgatc
tcgagcatcgagacgcccgatgccggcactgtggtgttcaagctctcccagcccgacgcg
ccgatcctgacggccatgaccgatctcaacgcggccatcgtgccggccagcgaaattgcc
gcgggcaccatcggcaccaaggccatcggctcgggtcccttcaagctcgaccagtgggag
cccaactccaaggaagtgctcagcaccaataaggattgggccggtggcgcagtgccgctc
gacggcatcaatatcagcgtcctgcccgacgagacggccatcctggccgcgctgcgcacc
ggtcaggtcgatttcgccctgctcaacgatccgctggtcgcgaccctcgtgccgcgcgaa
gcgaacctgcagctcaaccgccagccgggccttgcctataacgtcctgcagctcaacccc
tctcgctcgccgatgaccgaactgggcgtgcgccaagcgatctcctgcgcgatcgaccgc
caggaagtcctcgacacggcgctgctcggggaagggcaggtcaccggcccgctgaccatc
ccggcctatgcgaccgctcccaaggagctcttctgttacacacccgatctcgaaaaggcc
aggaagctgatggccgacgcgggccatgccgacggcttcgaggcgaccgtgatcgccgcg
accggcgaacctcctgtggccgcctcggaagcgcaggtcatccagtcccagcttgccgaa
atcggcatcaagctcaacatcgagaccatggaactaaacgtctatgtcgaccgctggctc
aagggcgacttcgacatggcggtggcccagaacggtggccgcgccgacccctacacgatg
tacaatcgctactggaccaaggacggcaacctgcagaaggtttccaactatatcgacgac
acgctcgatagcctgatgaagcagggccgcaccgaaaccgacccggccaagcgcaaggaa
atcttcgcacagttcgaaaaacacctcgcagaagtctcgccctggatctggctctcgacc
tcctacaactacacggcccagcagaagacggtgcatggcttcgtgcccacgccgaccggc
acgctgttcggcctgaccaaggtcaccctcgactaa
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