Devosia sp. H5989: XM25_04055
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Entry
XM25_04055 CDS
T04003
Name
(GenBank) hypothetical protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_04055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_04055
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_29
AAA_16
NB-ARC
PRK
nSTAND1
nSTAND3
ABC_ATPase
AAA_25
RsgA_GTPase
NACHT
AAA_5
NPHP3_N
RNA_helicase
NTPase_1
TsaE
AAA
DUF3987
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AKR54993
LinkDB
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Position
847579..849210
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AA seq
543 aa
AA seq
DB search
MTEQPALEISNLSVGYAGENGIIPAVEDVSLSIAPGEFVGLAGESGCGKSTIAQSILRLL
RAPGVITGGTIRICGNDVLSSNDDNVRALRWRTASIVLQNSLTSLNPVKRIGWQLQEVLD
RAKGSETARRTPAELLEMVDIDPARLRAFPHQLSGGQRQRVVIAMALALCPALVILDEPT
TALDVIVQQEILVTVKALQQRMGFAVLLITHDLPLLFDVADRIAVMKDGRIVESATIKDF
RRNPRHPYSRVLIEATPRLNLSEPGSARPPSAAHPVLETAHLRKTYGDAPWSHASALVAV
DDVSLRVAPSEIVAIVGASGSGKSTLGRMVTGLIRPTSGDILLDGRPPVPVSQRRKGQSR
AAQMVFQDVYGSLNPLHTIGHHLRRAVISAPSGGRDVARRVDDLLAEVGLTPPSNYLDRR
PHELSGGQRQRVGLARALAASPKLLVADEPVSMLDVSIRRDILSLIARLRDEQGVAVLYI
THDVISAGYIADRIVVMHRGQIVEEGPAKAVLANPRHDYTRRLIAAVPGGIAPADAAALQ
PAT
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaacccgcactcgaaatctcgaacctaagcgtcggttatgcgggcgaaaac
ggcataatcccggcagtcgaggacgtatcactctcgattgcccccggtgagttcgtcggg
ctcgcaggcgagtccgggtgcggcaagtcgacgatcgcccagtcgatcctgcgtctgctg
cgcgcgccgggcgtcatcacgggagggaccatccgcatctgcgggaacgatgtgctctcc
tcgaacgacgacaatgtgcgtgccctgcgctggcgcacggcatccatcgtgctgcagaat
tcgctgacttcgctcaacccggtcaagcgcatcggctggcaactccaggaggtgctcgat
cgcgccaaaggcagcgagacggcgcggcgaacccccgccgagcttctggaaatggtcgat
atcgaccccgcccgcttgcgagcctttccgcaccagctctcgggtggtcagcgacagcgc
gtcgtgatcgccatggcgctcgccctgtgtcctgcgctcgttatcctcgatgagcccacc
accgcgctcgatgtgatcgtgcagcaggagatactcgtcacggtcaaggctttgcagcaa
cgcatgggctttgccgtcctgctcatcacccacgatctgcccttgctcttcgatgtcgcg
gacaggattgccgtgatgaaggatggcaggatcgtcgaaagcgcgaccatcaaggatttc
cgccgaaaccccaggcatccctattctcgtgtcctgatcgaggcgacgcctcggttgaac
ctctccgagccgggttcggcgcggccgccgtcggctgctcatccggtcctggagacggcg
catctgaggaaaacctatggcgacgccccctggtcgcacgcatccgccctggtagccgtc
gatgatgtttcgctgcgggtcgcgcccagtgagatcgtggccatcgtcggtgcgtcaggc
agcgggaaatccacgctgggacgcatggtgacgggtctcattcgcccgacctcgggcgac
attctgctcgacggtcgcccaccggtgcccgtctcgcagcgcaggaaggggcaatcccgc
gcggcccagatggtcttccaggacgtctatggttcgctcaatcccctgcatacgatcggc
catcacctccgccgcgcggtcatctccgcgcccagtggcggcagggacgttgccaggcgg
gttgacgacctgctggccgaggtcgggctgacgcctccctccaattacctcgatcgtcgt
ccgcacgaattgtcgggcggccagcgtcagcgcgtgggcctcgctcgtgccctggcggca
tcgccaaagcttctggtggcggacgaacccgtctcgatgctcgacgtttccatccgccgc
gacatcctcagtctcattgcgcggctgcgcgacgaacagggcgtggctgttctctacatc
acgcacgacgtgatcagcgcaggctacatcgccgatcggatcgtggtcatgcaccgcggc
cagatcgttgaggagggccccgccaaggcggtgctcgccaatccccggcacgactacacc
cgccgcctcatcgccgccgttccaggcggcatcgctccggccgacgcggccgccctccaa
ccagcgacctga
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