Devosia sp. H5989: XM25_05140
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Entry
XM25_05140 CDS
T04003
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_05140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_05140
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_05140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKR55200
LinkDB
All DBs
Position
complement(1092300..1093796)
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AA seq
498 aa
AA seq
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MTITKVAAVVAVTFALSLAGPAGAQSPTDLNIGNFLDVTSWDPSLADIGFDGPYMSAVYD
PLVALDADGKILPALATTWTYSDDLLKLTMDLRTDVKFSDGEAFNAQAAVENLEHLKAGA
RSGEAYVNVAAFKAVDEDTIEIDLTKRDDSMLYLMGLGRSYMASPAAIKAGTLTTTPAGS
GPYVLDDGMSIPGSEYHFTKVADHWDSATYPFQNIAVYPILDATARHNAMLSGQINVNFA
DPLNIEQAKQMGWNINSAVSAWVGLQFVDHTGEHLKPLGDVRVRKALNYAFDGAAILNSI
GAGDGVVTNQVFPAGRQGNDPSLNALYAYNMDKAKALLAEAGYADGFDVTMPMSPIFAQW
QPVADQTFKELGIRVTWDDMQMPDYQINAPKYPMFITLIAMDNDPAATLARQVETVQWYN
PTPQYATVPELKSLVEAAQSAVGDDQIAKIAAANKALTEMAWWSVWYQANNTYFSTPDIA
VTPVTGMMFPTLRFIQPN
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcacgaaggtcgcagccgtagtggcggtgaccttcgctctcagcctggcgggt
cccgccggagcgcaaagcccgaccgacctcaatatcggcaacttcctcgacgtaacctcg
tgggatccgagcctggccgatatcgggttcgacggcccttacatgtcggccgtctacgat
ccgctggtggcgctggacgccgatggcaagatcctgccggcactcgccacgacgtggacc
tattcggacgacctgctcaagctgacgatggatctgcggacggacgtcaagtttagcgac
ggagaggcgttcaacgcccaggcggcagtcgagaacctcgaacacctcaaggcaggtgca
cgttcgggcgaggcctatgtcaacgttgccgccttcaaagccgtcgacgaggacacgatc
gagatcgacctcaccaagcgcgacgactccatgctctacctgatgggcctgggtcgcagc
tacatggcatcgccggccgcgatcaaggcaggcacgctgacgacgacaccagcgggttcg
ggtccctacgtgctcgatgacggcatgtcgatccccggctcggaatatcacttcaccaaa
gtggccgaccactgggacagcgccacctatcccttccagaacatcgccgtctatccgatc
ctggacgcgacggcgcggcacaatgcgatgctctcgggccagatcaacgtcaacttcgcc
gaccctctcaatatcgagcaggccaagcagatgggctggaacatcaactcggccgtttca
gcctgggtcgggctgcagttcgtcgaccataccggcgagcatctcaagccccttggcgac
gtgcgcgtgcgcaaggccctcaattacgccttcgatggcgccgccatcctcaattcgatc
ggcgcgggcgacggcgtggtgaccaaccaggtgtttcccgcaggcaggcaggggaacgat
ccgtcgctgaatgcgctctacgcctacaacatggacaaggccaaggccctgctggccgag
gctggctatgccgacgggttcgacgtcaccatgccgatgtcgcccatcttcgcgcaatgg
cagcccgtcgcggaccagaccttcaaggaactcggcatccgggtgacgtgggacgacatg
cagatgccggactaccagatcaatgcgcccaagtacccgatgttcatcacgctgatcgca
atggacaacgacccggcagccacgctggcgcggcaggtcgagacggtgcagtggtacaac
cccacgccccagtacgccacggtgcccgagctcaagtcgctcgtcgaggcagctcagtct
gcggtcggagacgaccagatcgccaagatcgcggcagccaacaaggctctgaccgagatg
gcttggtggtcggtctggtaccaggccaacaacacctacttctcgacgcccgatattgcc
gtgaccccggtaacgggcatgatgttcccgaccctgcggttcatccagccgaactag
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