Devosia sp. H5989: XM25_05380
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Entry
XM25_05380 CDS
T04003
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
deq03000
]
XM25_05380
Transcription factors [BR:
deq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
XM25_05380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_Crp_2
HTH_31
DUF8494
AbiEi_4
OsmC
Motif
Other DBs
NCBI-ProteinID:
AKR55247
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Position
1142571..1143620
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AA seq
349 aa
AA seq
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MFARKHCMAFEGKDERTRNVRVEDVAREAGVSPITVSRALSTPEIVKPETRERVLRAVEK
TGYVVNTLASSLRSGRSSFIAMFVSNIENPHFARATRGCADALENSGFHLMMAQTNYSAR
LEADFVGSVLPLRPAALIFTGVVQAPTTKTLIRSRGMAVMEMWDHVEDPLDMLVGFSNLD
GGRLMGEHFGRAGFRNIAYVGRTQDRGAQRLAGFREGLAATGAELGHVAPLDGHPPVIAD
GAQALRTVMQRYPQVDAIFFSSDVLAVGASLEAARDDATSHVAFAGYGDSGLAEALPVPL
TTVHVSSYEMGFRAGKMLLRRLAGESVRERSIVLPNELRIRQSTARFIN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgccaggaagcattgcatggcctttgagggaaaggacgagcggacgcgcaacgtc
cgcgtcgaggatgtggcacgggaggctggagtgtccccgatcaccgtgtcgcgcgcgctg
agcacccccgagatcgtcaagcccgaaacgcgcgaacgcgtgctgcgcgccgtggaaaag
accggctacgtggtcaatacgcttgcgtccagcctacggtccggacgctcctcgttcatc
gccatgttcgtttccaacatcgagaaccctcactttgcgcgcgccacgcgcggctgcgcc
gatgccctggagaacagcggcttccatctcatgatggcccagaccaactattcggcccgc
ctcgaggccgatttcgttggctctgtgttgccgctacgtcccgccgccctgatcttcacc
ggggtcgtgcaggcgccgaccaccaagaccctcattcgttcgcgcggcatggcggtgatg
gagatgtgggaccatgtggaagatccgctcgacatgctggttggcttctccaatctggat
ggcggtcgtctcatgggcgaacatttcggacgtgccgggttcaggaacatagcctatgtc
ggtcgcacgcaggatcggggtgcccagcgtcttgccgggttcagggaagggcttgccgca
accggggcggaactcggccacgttgccccgctcgatggccatcctcctgtgatcgccgat
ggcgcccaggctctccgaacggtgatgcagcgatatccgcaggtcgatgccatctttttc
tcgtccgatgtccttgcggtaggcgcttcgctcgaagccgcccgtgacgatgccaccagc
cacgtcgcctttgctggctacggcgattccggtctcgccgaggcgctgcccgtgcccctc
acgacggtccatgtctccagttacgaaatgggcttccgtgccggcaagatgctgcttcgt
cgcctcgcgggagaatccgtgagggagcggagcatcgttctcccaaacgagttgcgcatt
cgccagagcaccgcgcgcttcatcaattaa
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