Devosia sp. H5989: XM25_05470
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Entry
XM25_05470 CDS
T04003
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
deq
Devosia sp. H5989
Pathway
deq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XM25_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deq03021
]
XM25_05470
03400 DNA repair and recombination proteins [BR:
deq03400
]
XM25_05470
Enzymes [BR:
deq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XM25_05470
Transcription machinery [BR:
deq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XM25_05470
DNA repair and recombination proteins [BR:
deq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XM25_05470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AKR55264
LinkDB
All DBs
Position
1160289..1160657
Genome browser
AA seq
122 aa
AA seq
DB search
MARVTVEDCIEKIENRFDLVLMAAHRARMISSGSQITVDRDNDKNPVVALREIGDGAISP
EDLREDLIHSMQKYVEVDEPEMHAAPLIESGNDDDNMTFDTMSEDELLRGIESLAPPERR
DD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcgtcacagttgaagactgcatcgaaaagatcgagaaccgcttcgatctggtg
ctcatggcggctcatcgcgctcgcatgatttcgtccggttcccagatcacggtggaccgc
gacaacgacaagaacccggtcgtcgccctgcgcgagatcggcgatggcgcgatttcgccc
gaggatctgcgcgaagacctgatccattccatgcagaagtacgtcgaagtcgacgaaccc
gaaatgcatgctgcccctctgatcgagagcggcaacgacgacgacaacatgaccttcgac
accatgagcgaagacgaattgctgcgcggcatcgagagcctggcgccgccggagcgtcgc
gacgattga
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