Devosia sp. H5989: XM25_05495
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Entry
XM25_05495 CDS
T04003
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deq03019
]
XM25_05495
03009 Ribosome biogenesis [BR:
deq03009
]
XM25_05495
03036 Chromosome and associated proteins [BR:
deq03036
]
XM25_05495
Enzymes [BR:
deq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XM25_05495
Messenger RNA biogenesis [BR:
deq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XM25_05495
Ribosome biogenesis [BR:
deq03009
]
Eukaryotic type
90S particles
RNase
XM25_05495
Prokaryotic type
rRNA processing factors
XM25_05495
Chromosome and associated proteins [BR:
deq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XM25_05495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AKR55269
LinkDB
All DBs
Position
1164823..1165530
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AA seq
235 aa
AA seq
DB search
MSMKVRGHQKLEARLGYRFADPDLLDRALTHSSAVSPGKRIERSYQRLEFLGDRVLGLVV
ADMLYRRLPKANEGELSRTLNTLVRKETCAAIARELDLGPELNLGESEARTGGAEKEAIL
ADVAEAVIGAIYCDGGLGKAFEFIERMFGDRIGVLHADRADAKTTLQEWAQGRGLEPPTY
VLAARTGPDHAPEFTISVQVGKFEPLTATGASKKIAEHKAAEKFLVREKVWKETL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaaggttcggggtcatcaaaagctggaggcccgtctgggttaccgcttcgct
gacccggatctgctcgaccgtgcgctgacccattcgagtgccgtctcgccgggcaagcgt
atcgagcggtcctaccagcgccttgaattcctgggcgaccgcgtgctcgggctcgttgtc
gcggacatgctctatcgccgcctccccaaggcgaacgagggtgagctttcgaggacgctc
aacacgctggtccgcaaggaaacctgcgccgccatcgcccgcgaactcgatctcggcccc
gaactcaacctgggcgagagcgaagcgcggaccggtggcgccgagaaggaagcgatcctt
gccgacgtcgccgaggccgtgatcggcgccatctactgcgacggcgggctgggcaaggcc
ttcgaattcatcgaacgcatgttcggagaccggattggcgtgcttcatgccgaccgtgca
gacgccaagacgacgttgcaggaatgggcccagggccggggattggagccgccgacttat
gtcctggcggcccggaccggccccgaccacgcccccgagttcaccatttcggtgcaggtg
ggtaagttcgaaccgctgaccgccactggcgccagcaagaagattgccgagcacaaggcg
gccgagaaattcctcgtgcgcgagaaagtctggaaggaaactctttga
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