Devosia sp. H5989: XM25_05595
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Entry
XM25_05595 CDS
T04003
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
deq
Devosia sp. H5989
Pathway
deq00260
Glycine, serine and threonine metabolism
deq00460
Cyanoamino acid metabolism
deq00630
Glyoxylate and dicarboxylate metabolism
deq00670
One carbon pool by folate
deq00680
Methane metabolism
deq01100
Metabolic pathways
deq01110
Biosynthesis of secondary metabolites
deq01120
Microbial metabolism in diverse environments
deq01200
Carbon metabolism
deq01230
Biosynthesis of amino acids
deq01240
Biosynthesis of cofactors
deq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XM25_05595 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XM25_05595 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XM25_05595 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XM25_05595 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XM25_05595 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XM25_05595 (glyA)
Enzymes [BR:
deq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XM25_05595 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AKR55288
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Position
1181690..1182991
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AA seq
433 aa
AA seq
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MSAATSLPLFPHFFSDTLAQTDPEIAQAINQELGRQQNEIELIASENIVSKAVLEAQGSI
MTNKYAEGYPGKRYYGGCEFVDIAENLAISRAKDLFGVEFVNVQPNSGSQANQGVYQALL
QPGDTILGMSLDGGGHLTHGAKPNQSGKWFNAIQYGVRKQDGRVDMDEMRALALQHRPKL
IVAGFSAYSRVMDWAAFRAVADEIGAYLMVDMAHVAGLVAGGVYPSPFPHAHIATTTTHK
TLRGPRGGMIMTNDEDIAKKINSAIFPGIQGGPLMHVIAAKAVAFKEAQSGEFKLYARQV
VANAKVLAETLVRGGLDIVTGGTDNHLMLVDLRPKKLTGKAAEKALERAHITCNKNAVPF
DPEKPAITSGIRVGTPAATSRGFREPEFQLVGELMVEVLDGLATNGEDNNGSVEATVRDK
VKKLTDAFPIYGQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgccacgtcacttccgctctttccgcatttcttctctgacacgctggcccag
accgatcccgagatcgcacaggccatcaatcaggagctcggtcgtcagcagaacgagatc
gagctgatcgcgtccgagaatatcgtttccaaggccgtgctcgaagcccagggctcgatc
atgaccaacaaatacgcggaaggttatccgggtaagcgctactacggcggttgtgagttc
gtcgacatcgccgagaacctggcgatctcgcgcgccaaggacctgttcggggtcgaattt
gtcaacgtgcagcccaattccggctcgcaggccaaccagggcgtctaccaggcgctgctg
cagccgggcgataccatcctgggcatgtcgctcgatggcggcggtcacctgacccacggt
gccaagccgaaccagtccggcaagtggttcaatgccatccagtacggcgtgcgcaagcag
gacgggcgcgtcgacatggacgagatgcgcgccctggcgctccagcaccgtcccaagctg
atcgtggccggcttctccgcctattcgcgcgtcatggactgggcggcgttccgcgccgtt
gccgacgagatcggcgcctacctcatggtcgacatggcgcatgtggcgggcctcgttgcc
ggcggcgtctatccgagcccgttccctcacgcccatatcgccaccaccaccacgcacaag
acgctgcgcggtccccgtggcggcatgatcatgaccaatgacgaggacatcgccaagaag
atcaactcggcgatcttcccgggcatccagggtggcccgctgatgcacgtcatcgcggcc
aaggccgtggccttcaaggaagcgcagtcgggcgagttcaagctctatgcgcgccaggtc
gtggccaatgccaaggtactggccgagacgctggttcgcggcggcctcgacatcgtcacc
ggcggcaccgacaaccacctgatgctggtggacctgcgccccaagaagctcaccggcaag
gcagccgaaaaggccctcgagcgcgcccacatcacctgcaacaagaacgcggtgccgttc
gatccggaaaagccggcgatcacctcgggtatccgcgtgggtacgcctgcggcgacctcg
cgcggtttccgcgagccggaattccagctcgtcggcgaactgatggtcgaagtgctcgat
ggcctggctaccaatggcgaggacaacaacggcagcgtcgaggccactgtccgcgacaag
gtcaagaagctcaccgacgccttcccgatctacgggcagtaa
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