Devosia sp. H5989: XM25_08980
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Entry
XM25_08980 CDS
T04003
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_08980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_08980
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
XM25_08980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
CysA_C_terminal
SMC_N
SbcC_Walker_B
AAA_29
ABC_ATPase
AAA_33
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
Zeta_toxin
AAA_23
NACHT
Rad17
AAA_18
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AKR55931
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All DBs
Position
1873012..1874082
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AA seq
356 aa
AA seq
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MARLEINGVTKKFGTTTAVDTFSLDVGDGELVCLLGPSGSGKSTVLRMIGGFETPTGGSI
RIDGEEVARLPPEKRPTTMVFQSHALWSHMTVAGNIGFGLKLRRLPKKQIAEKVDQVLEL
VGLAGYGKRQTNQLSGGQQQRVALARSLVLEPKILLLDEPFASLDQHLRERLREEVRDIQ
QRLKITALFVTHGQDEALALADRIVVMRDGHIEQIDRPDVLYREPQTPFVAGFIGTMNFV
EGQVRNGMFTGGGMTMGAPVAEGPATLAVRPEALSLSGALAPDAATVHRVVDFGTHAIID
LDLPDEVRAKAMVSPDHEWKGADRVLLKPERFALFRDNAVLYRSQPSAIQTARHAQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttggaaatcaacggcgtcaccaagaaattcgggacgaccacggctgtcgac
accttttcgctcgatgtcggtgacggggaactggtctgcctgctcggcccctcgggctcg
ggcaagtcgaccgtcctgcgcatgatcggcggcttcgagacgcccacgggcggctcgatc
cgcatcgacggcgaagaggtggcgcgcctgccgcccgaaaagcgcccgaccaccatggtg
ttccagagccacgcgctctggagccacatgaccgtcgccggcaatatcggcttcggcctc
aagctgcgccgcctgcccaagaagcagatcgccgaaaaggtcgaccaggtgctcgaactg
gtgggcctggccggctacggcaagcggcagaccaaccagctttcgggcggccagcagcag
cgcgtggccctggcccgctcgctggtgctcgaacccaagatcctgctgctcgacgaaccc
ttcgccagcctcgaccagcatttgcgcgagcgcctgcgcgaggaagtgcgcgacatccag
cagcgcctcaagatcaccgcgctcttcgtgacccatggacaggacgaagccctggcgctg
gccgaccggatcgtggtgatgcgggacggccatatcgagcagatcgaccggcccgacgtg
ctctaccgcgagccgcagaccccgttcgtggccggcttcatcggcaccatgaatttcgtg
gaaggccaggtgcggaacggcatgttcaccggcggcggcatgaccatgggcgcgccggtc
gccgagggcccggctaccctcgccgtgcgccccgaggcgctttcgctatcgggcgccctg
gccccggatgcggccacggtgcatcgcgtcgtcgatttcggcacccacgccatcatcgac
ctcgacctgccggacgaggtgcgggccaaggccatggtctcgcccgaccacgaatggaag
ggcgccgaccgcgtcttgctcaagccggagcgcttcgcgctcttccgcgacaacgccgtg
ctctaccgttcccagccgtcagcgatccagaccgcccgccatgcccagtga
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