KEGG   Devosia sp. H5989: XM25_08980
Entry
XM25_08980        CDS       T04003                                 
Name
(GenBank) ABC transporter
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
deq  Devosia sp. H5989
Pathway
deq02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:deq00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XM25_08980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:deq02000]
    XM25_08980
Transporters [BR:deq02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    XM25_08980
SSDB
Motif
Pfam: ABC_tran AAA_21 TOBE_2 CysA_C_terminal SMC_N SbcC_Walker_B AAA_29 ABC_ATPase AAA_33 AAA_16 nSTAND1 RsgA_GTPase AAA_22 Zeta_toxin AAA_23 NACHT Rad17 AAA_18 AAA_5
Other DBs
NCBI-ProteinID: AKR55931
LinkDB
Position
1873012..1874082
AA seq 356 aa
MARLEINGVTKKFGTTTAVDTFSLDVGDGELVCLLGPSGSGKSTVLRMIGGFETPTGGSI
RIDGEEVARLPPEKRPTTMVFQSHALWSHMTVAGNIGFGLKLRRLPKKQIAEKVDQVLEL
VGLAGYGKRQTNQLSGGQQQRVALARSLVLEPKILLLDEPFASLDQHLRERLREEVRDIQ
QRLKITALFVTHGQDEALALADRIVVMRDGHIEQIDRPDVLYREPQTPFVAGFIGTMNFV
EGQVRNGMFTGGGMTMGAPVAEGPATLAVRPEALSLSGALAPDAATVHRVVDFGTHAIID
LDLPDEVRAKAMVSPDHEWKGADRVLLKPERFALFRDNAVLYRSQPSAIQTARHAQ
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggctcgcttggaaatcaacggcgtcaccaagaaattcgggacgaccacggctgtcgac
accttttcgctcgatgtcggtgacggggaactggtctgcctgctcggcccctcgggctcg
ggcaagtcgaccgtcctgcgcatgatcggcggcttcgagacgcccacgggcggctcgatc
cgcatcgacggcgaagaggtggcgcgcctgccgcccgaaaagcgcccgaccaccatggtg
ttccagagccacgcgctctggagccacatgaccgtcgccggcaatatcggcttcggcctc
aagctgcgccgcctgcccaagaagcagatcgccgaaaaggtcgaccaggtgctcgaactg
gtgggcctggccggctacggcaagcggcagaccaaccagctttcgggcggccagcagcag
cgcgtggccctggcccgctcgctggtgctcgaacccaagatcctgctgctcgacgaaccc
ttcgccagcctcgaccagcatttgcgcgagcgcctgcgcgaggaagtgcgcgacatccag
cagcgcctcaagatcaccgcgctcttcgtgacccatggacaggacgaagccctggcgctg
gccgaccggatcgtggtgatgcgggacggccatatcgagcagatcgaccggcccgacgtg
ctctaccgcgagccgcagaccccgttcgtggccggcttcatcggcaccatgaatttcgtg
gaaggccaggtgcggaacggcatgttcaccggcggcggcatgaccatgggcgcgccggtc
gccgagggcccggctaccctcgccgtgcgccccgaggcgctttcgctatcgggcgccctg
gccccggatgcggccacggtgcatcgcgtcgtcgatttcggcacccacgccatcatcgac
ctcgacctgccggacgaggtgcgggccaaggccatggtctcgcccgaccacgaatggaag
ggcgccgaccgcgtcttgctcaagccggagcgcttcgcgctcttccgcgacaacgccgtg
ctctaccgttcccagccgtcagcgatccagaccgcccgccatgcccagtga

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