Devosia sp. H5989: XM25_09470
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Entry
XM25_09470 CDS
T04003
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
deq
Devosia sp. H5989
Pathway
deq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XM25_09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deq03021
]
XM25_09470
03400 DNA repair and recombination proteins [BR:
deq03400
]
XM25_09470
Enzymes [BR:
deq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XM25_09470
Transcription machinery [BR:
deq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XM25_09470
DNA repair and recombination proteins [BR:
deq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XM25_09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Phage_tube_2
RNA_pol_L_2
MR_MLE_C
Motif
Other DBs
NCBI-ProteinID:
AKR56024
LinkDB
All DBs
Position
complement(1969542..1970561)
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQRNWQELIKPTKLDIVSGSDNARVASVVAEPLERGYGLTLGNALRRVLLSSLQGAAV
TAIQIDGILHEFSSLPGVREDITDLVLNVKEIAIKMNAEGPKRLTLSKQGPGAVVAGDIK
VSGDIEVLNPELVICHLDDGAEINIEFTVNTGKGYVPADRNRPEDAPIGYIPVDALFSPV
RRVSYKVDATREGQVLDYDKLTLQVETNGAVTPEDAVAYAARILQDQLTVFVNFEEPTKE
KAQDAVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMDVANWPPENIDDLAKRYEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatccagaggaactggcaggaattaatcaagccgaccaagctggacattgtttcg
ggcagcgacaacgcgcgcgtggcttcggtcgtggccgaaccgcttgagcgcggctatggt
ctcaccctgggcaacgctctgcgtcgcgtgctgctgtcgtccctgcagggcgcggctgtc
accgcgatccagatcgacggcattctgcacgaattctcgtcgctccctggcgtgcgcgag
gacattaccgacctcgtcctgaacgtcaaggaaatcgccatcaagatgaatgccgagggc
ccgaagcgcctgaccctgtccaagcaggggccgggtgccgtggttgccggcgacatcaag
gtgtcgggcgacatagaggttctcaatcccgagctcgtgatctgccatctcgatgatggc
gccgagatcaacatcgagttcaccgtcaataccggcaagggctatgtccctgccgaccgt
aaccgtcccgaggacgcgcccatcggctatattcctgtcgatgcgctgttctcgccggtg
cgccgtgtctcctacaaggtcgacgccacccgtgagggccaggtgctcgactacgataag
ctgacccttcaggtcgagaccaacggcgcggtgaccccggaagatgcggtggcctatgcc
gcccgtatcctccaggaccagctcacggtcttcgtcaacttcgaagagccgaccaaggaa
aaggcccaggacgctgtcccggaactcgccttcaatcctgctctgctcaagaaggtggac
gagctggagctctccgtgcgttcggcgaactgcctgaagaacgacaacatcgtgtacatt
ggcgacctcatccagaagaccgaggccgaaatgctccgcactcccaatttcgggcgcaag
tcgctcaacgagatcaaggaagtgctggcgcagatgggtctgcatctgggcatggacgtg
gccaactggccgcctgaaaacatcgacgacctcgccaagcgctacgaagatcattattga
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