Devosia sp. H5989: XM25_11085
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Entry
XM25_11085 CDS
T04003
Symbol
UvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
deq
Devosia sp. H5989
Pathway
deq03420
Nucleotide excision repair
deq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XM25_11085 (UvrD)
03430 Mismatch repair
XM25_11085 (UvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deq03400
]
XM25_11085 (UvrD)
Enzymes [BR:
deq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XM25_11085 (UvrD)
DNA repair and recombination proteins [BR:
deq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XM25_11085 (UvrD)
MMR (mismatch excision repair)
Other MMR factors
XM25_11085 (UvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKR56329
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Position
2262537..2264870
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AA seq
777 aa
AA seq
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MPAEPQRLAPSAGGPITSQLGRRGPDYLQGLNEEQRDAVLTIDGPLLVLAGAGTGKTRVL
TTRIAHILSTRKARGSEILAVTFTNKAAREMKERIASLVGSSVEGMPWLGTFHSIGARIL
RRHAELVDLKPAFTILDTDDQIRLIKQLLEAENIDEKRWPARQFAGMLDDWKNRGLLPRD
VTPAESGFYANGKGAKLYADYQARLKTLNAADFGDLLLECIRLFRENPKVLEEYHQRFKY
MLVDEYQDSNVAQYLWLRLLAQGRPANEANICVVGDDDQSIYGWRGAEVDNILRFEKDFP
GAKVIRLERNYRSTANILAAASHLIAHNEGRLGKTLHTDVAEKGETVAVTSVWDSEEEAR
QIGEEIEQFQRQGETLNSMAILVRASFQMREFEERFITLGLNYRVIGGPRFYERKEIRDA
LAYFRLVAQPADDLAFERIVNTPKRGLGDSTLKILFDAARHQNVPLLSATRMLIETEELK
SKQRTTLRDLVGQFDDWSERLRTIPHAELAEQILDESGYTAMWQNDKSADSPGRLENLKE
LVRSMEEFETMGGFLEHVALVMDRDSFEADDAVSIMTLHSAKGLEFNTVFLPGWEEGLFP
HQRSLDESGRAGLEEERRLAYVGITRGRKRVRISLAQNRRIHGLWQSAIPSRFLDELPAE
VVEVKDTGSSYGGYGYGGRTANRFQSVDPFESVYETPGWQRARAQQAQRKGSGPLTIEGE
LVARSVDLGPGSGYKVGDRVFHNKFGYGEIAALEGNKLTIDFQTGRKKVLDSFIRKA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgaaccgcaaagactcgccccgtccgcaggaggcccgattaccagccagctc
ggccggcgcggacctgactatctgcaggggctcaatgaagagcagcgcgacgccgtcctg
accatcgacgggccgctgctggttctcgccggcgcgggtacgggcaagacgcgcgttctc
accacccgcatcgcccacatcctttccacccgcaaggcgcgcggctcggaaatcctggcg
gtgaccttcaccaacaaggccgcccgcgagatgaaggagcgcatcgccagtctcgtcggc
tcctcggtcgaaggcatgccgtggctgggcacgttccactccatcggcgcgcgtatcctg
cgccgccatgccgaactggtggacctcaagcccgccttcaccattctcgataccgatgac
cagatccggctcatcaagcagctcctcgaagccgagaacatcgatgagaagcgttggccg
gcccggcagttcgccggcatgctcgacgactggaagaaccggggcctgcttccccgggac
gtgacccccgccgagagcggcttttacgccaacggcaagggcgccaagctctatgccgac
taccaggcgcgcctcaaaaccctcaatgccgccgatttcggtgacctgctgctcgaatgc
atccggctcttccgcgagaacccgaaggtgctcgaggaatatcaccagcgcttcaagtac
atgctggtggacgaataccaggacagcaacgtggcccagtatctctggctgcgcctgctc
gcccaagggcgccccgccaacgaggccaatatctgcgtggtgggcgacgacgaccagtcg
atctacggctggcgcggcgccgaggtcgacaacatcctgcgcttcgagaaggattttccg
ggcgccaaggtaatccggctcgagcgcaactatcgctccaccgccaatatcctggcggcc
gccagccacctcatcgcccataacgagggccgcctcggcaagaccctacacaccgatgtc
gccgagaaaggcgagacggttgccgtcacctccgtctgggacagcgaggaggaagcccgc
cagatcggggaagaaatcgagcagttccagcgccagggcgaaacgctcaactccatggcg
atcctggtgcgcgcctcgttccagatgcgcgaattcgaagagcgcttcattaccctgggc
ctcaactaccgcgtcatcggcggcccgcgcttctacgagcgcaaggaaatccgcgatgcg
ctggcctatttccgtctcgtggcgcagcccgccgacgacctggccttcgagcgcatcgtc
aacacgccaaagcgcggcctgggcgactccacgctcaagatcctcttcgatgccgcccgg
caccagaacgtgcccctgctctcggcgacgcgcatgctcatcgagaccgaggagctcaaa
tccaagcagcgcaccaccctgcgcgacctcgtgggacagttcgacgattggtccgaacgc
ctgcgcaccatcccgcatgccgaactcgccgagcagattctcgatgagagcggctatacg
gccatgtggcagaacgacaagtccgccgacagcccggggcgcctcgaaaacctcaaggaa
ctcgtgcgctccatggaagaattcgagaccatgggcggcttcctcgagcacgtcgcgctg
gtcatggaccgcgacagcttcgaggccgacgacgccgtttccatcatgacgctgcactcg
gccaagggcctcgagttcaacaccgtcttcctgccgggctgggaggaaggcctcttcccc
catcagcgctcgctcgacgaatccggccgcgccgggctcgaggaagagcggcgcctcgcc
tatgtcggcatcacccgcggccgcaagcgcgtgcgcattagcctggcccagaaccgccgc
atccacggcctctggcaatcggcaattccctcgcgcttcctcgatgaactccccgccgag
gtggtggaggtcaaggacaccggttcttcctatggcggctacggctatggcgggcgcacc
gccaaccgcttccagtcggtcgaccccttcgaaagcgtctacgaaaccccaggctggcag
cgcgcccgcgcccagcaggcccagcgcaagggttcgggcccgctcaccatcgaaggcgag
ctggttgcgcgctccgtcgatctcggccccggctcgggctacaaggtcggcgaccgcgtg
ttccacaacaagttcggctacggcgaaatcgccgcgctcgagggtaacaagctcaccatc
gatttccagaccggtcgcaagaaggtgctggatagcttcatccgcaaagcctga
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