Devosia sp. H5989: XM25_12765
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Entry
XM25_12765 CDS
T04003
Name
(GenBank) iron ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_12765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_12765
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
XM25_12765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
AKR56652
LinkDB
All DBs
Position
2609715..2610824
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AA seq
369 aa
AA seq
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MTFQKACVVSVSVVALIASAAPSFAQTDLNALYEAAKGESQLTVIALPHDWCGYGAVIDG
FKAKYPGITVNELNPDAGSADEIEAIKANKDNTGPQAPDVIDVGLPFGPSAKADGLIQPY
KVSTWDTIPDSAKDADGYWYGDYYGAMAFLVNSDLVSKAPTSWAELTGADYANAVALAGD
PRASAQAIQSVYAAGLAAGGKTAEDAANAGLKFFADVNAKGNFVPVIGKAASLAQGTTPI
VIAWDYNALAWRDGFAGNPKAEVIIPSDSVVAGVYVQAISAYAPHPNAAKLWMEYLYSDE
GQLGWLKGYCHPIRFNDLADNGKIPQELLDALPPAANYAKAVFPTVDEQNAAKAIITKDW
DSVVGANVQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactttccagaaagcgtgtgtcgtgtcggtatcggtcgtagcgctcatcgcgtcggcc
gccccgtcattcgctcagaccgatctcaatgcgctttacgaagccgcaaagggcgaaagc
cagctcaccgtcatcgcgctgccgcacgactggtgcggctatggcgctgtgatcgacggc
ttcaaggccaagtatcccggcatcaccgtcaacgagttgaacccggacgccggctcggcc
gatgaaatcgaagccatcaaggccaacaaggacaacaccggtccccaggctcccgacgtg
atcgacgtcggcctgcccttcggcccctccgccaaggccgacggcctcatccagccctac
aaggtctccacctgggatacgatccccgacagcgccaaggatgccgacggctactggtac
ggtgactattacggcgccatggctttcctcgtgaacagcgacctcgtctccaaggctccg
acctcctgggctgaactgaccggtgccgattacgccaacgccgtcgccctcgccggcgac
ccgcgcgcttcggcccaggccatccagagcgtctacgctgccggcctcgccgctggcggc
aagaccgccgaggacgccgccaacgccggcctcaagttcttcgccgacgtcaacgccaag
ggcaacttcgtgcccgtgattggcaaggccgcctcgcttgcccagggcaccaccccgatc
gtcatcgcctgggactacaacgccctggcctggcgtgatggctttgcaggcaaccccaag
gccgaagtcatcatcccgtccgattccgtggtcgccggtgtctacgtccaggccatctcg
gcctacgccccgcaccccaacgcagccaagctctggatggagtatctctattcggacgaa
ggtcagctcggctggctcaagggctattgccacccgatccgcttcaacgacctggccgac
aacggcaagatcccgcaggaactgctcgacgcacttccgccggccgccaactacgccaag
gccgtcttcccaaccgtggatgaacagaacgccgccaaggcgatcatcaccaaggattgg
gactcggtcgtcggggccaatgtccagtaa
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