Devosia sp. H5989: XM25_14560
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Entry
XM25_14560 CDS
T04003
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
deq
Devosia sp. H5989
Pathway
deq00061
Fatty acid biosynthesis
deq00071
Fatty acid degradation
deq01100
Metabolic pathways
deq01212
Fatty acid metabolism
deq02024
Quorum sensing
deq04146
Peroxisome
Module
deq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XM25_14560
00071 Fatty acid degradation
XM25_14560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XM25_14560
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_14560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
deq01004
]
XM25_14560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
deq04147
]
XM25_14560
Enzymes [BR:
deq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XM25_14560
Lipid biosynthesis proteins [BR:
deq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XM25_14560
Exosome [BR:
deq04147
]
Exosomal proteins
Exosomal proteins of breast milk
XM25_14560
Exosomal proteins of breast cancer cells
XM25_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AKR56992
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All DBs
Position
2976032..2977759
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AA seq
575 aa
AA seq
DB search
MASAVETPDHPRPWLSHYPEGISWELDADFQPVHEQVLAACAREPLATALDFLGGTMSFG
ELARSIISLAGALQKQFGVRKGVRVALMLPNTPFYVISYYAVLRAGGTVVNCNPLYTVHE
LAHIASNAKADLMITLDLKQIFEKAEALVEAGHVKSLVVCHFPEALPLVKRALFSIAKGR
DLANVGKSRVAEKITRFTEMLGRKETPEPVIIDKIKDIAVQQYTGGTTGLPKGAMLTHAN
IAANMAQIDAWGCGLFYPPSKVIAVLPFFHIFAMTVCMNVPLCNGIQVVMLPRFELKSLL
DIFMRTKANILPAVPTLLQALAKADIKAEQIASLEIAISGGAPLPNEVRSKFARISPARL
AEGYGLTEASPVVCCAALKVASKPMSIGLPLPGTDLRFVDVDTGKTVGIGEPGELQVRGP
QVMAGYFDDEQSTRDAFMDGWLRTGDVGYVDEDGYVFLVDRIKDLIISSGFNVYPRNIEE
ALMEHELVDEANVIGVPDDYRGEAPVAFVKLVSGASIGEAELKTFISAKLNKMEMPREII
FKDALPKTLIGKLSKKELREEYSQRKGQRREPART
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcggtcgagacccctgaccacccacgtccctggctgagccattacccggaa
gggataagctgggagctcgatgccgatttccagccggtgcacgagcaggtcctggcggcc
tgcgcccgcgagcccctggcgacggcactcgatttcctgggcggcacgatgagctttggc
gaactggcccgctcgatcatctcgcttgccggcgcgctccagaagcagttcggcgtccgg
aagggtgtgcgcgttgcgctgatgctccccaacacgcccttctacgtcatttcctattat
gcagtgctccgtgccggcggcacggtggtcaactgcaacccgctctataccgtgcacgag
ttggcccacatcgcctcgaacgccaaggccgacctgatgatcacgcttgatctcaagcag
atcttcgaaaaggccgaggccctggtcgaggcgggccacgtcaagtcgctggtcgtctgc
cacttccccgaagcgctgccgctggtcaagcgcgcgctcttttccatcgccaagggccgc
gacctggccaatgtcggcaagtcgcgggtggcagagaaaattacccgcttcaccgaaatg
ctggggcgcaaggaaacgcccgaaccggtgatcatcgacaagatcaaggacattgccgtc
cagcaatataccggcggcaccaccgggctccccaaaggcgccatgctcacccatgccaat
atcgcggccaacatggcccagatcgacgcctggggctgcgggttgttctacccgccctca
aaggtcatcgccgttctgcccttcttccatatcttcgcgatgaccgtgtgcatgaacgtg
ccgctgtgcaacggcatccaagtggtcatgctgccccgcttcgagctgaagtcgctgctc
gacatcttcatgcgcaccaaggccaatatcctgccggccgtgccgaccctgctccaggcc
ctcgccaaggccgacatcaaggccgagcagatcgccagcctcgagatcgccatttccggc
ggcgccccgcttcccaatgaggtccgctccaagttcgccaggatttcaccggcgcgactc
gcggagggctatgggttgaccgaggcctctccggtcgtctgctgcgccgcgctcaaggtg
gcttccaagccgatgtcgatcggcctccccctgcccggcactgatctgcggttcgtcgat
gtcgataccggcaagaccgtcggcatcggcgagcccggggaactccaggtcaggggcccc
caggtcatggccggatatttcgacgacgagcagtccacgcgcgacgccttcatggacggc
tggctgcgcaccggcgacgtcggctatgtcgatgaggacggctacgtcttcctcgtcgat
cgcatcaaggacctcatcatctcgtccggcttcaacgtctatccgcgcaatatcgaagaa
gcgctgatggagcacgagctggtggacgaggcaaatgtcatcggcgtgccggacgactat
cgcggcgaagcgccggtggccttcgtcaagctggtcagcggcgcctcgatcggcgaggcg
gagctcaagaccttcatctcggccaagctcaacaagatggagatgccgcgcgagatcatc
ttcaaggatgccttgccgaaaaccctgatcggaaagctctccaagaaagagctgcgggag
gaatacagtcagaggaaagggcagcgccgtgaaccggccagaacctga
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