Devosia sp. H5989: XM25_14770
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Entry
XM25_14770 CDS
T04003
Name
(GenBank) ATP-dependent DNA ligase
Organism
deq
Devosia sp. H5989
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
CATASP
Motif
Other DBs
NCBI-ProteinID:
AKR57032
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Position
complement(3026951..3029398)
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AA seq
815 aa
AA seq
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MAQLNTYRGKRDFSKTPEPSGRAAQPGGNRYVIHEHGATSHHYDLRLELDGVLKSWAVPK
GPSLNPDDKRLAVETEDHPVEYLDFEGVIPEGEYGGGPMIVWDRGVWAPMGDIEEAFRTG
DFKFRLAGEKLSGGWMLKRLRPKRGEDPDKVNWLFFKEHDPAASTSENILETRPQSVKSG
LTIDEVRPAPPRPKRPVKLEPGKLKGAVAAPMPTKIQPQLATAIADPPPGPGEKTRWLHE
IKFDGYRTIAFLEDREARLITRAGLDWTNRYRRLANTFAQIPCRQAVIDGEVVVVGSDGV
TTFAALQEALAENRSHDLTFFAFDLLYLDGYDLRNVALIERKQLLADLLGPIISGKSAIQ
YSDHFEGEGAGLLALATEKGLEGIVSKRADARYESARTTTWVKTKARKVGDFLIVGFTRS
EAAGGLGALGLGEMVDGKLEYRGKVGTGFDAHTLGELLEKLEPLVAAGAPLARAPKDLVR
VEPVYSAHVHFANRTNDGSLRHAVFMGLIEPEVETNRPERKRLISDADLASVSITNPTRR
LFGDDGPTKLDLAVYYGLVGDFMLPHIMGRPVTLVRSPSGKADDIFYQRHPFSGMPKSVG
AFDAINSDGEARQYLSVEDPKGYLALAQFGVIEFHTWGCHHALLEKPDRIVFDLDPGEGI
TWRNIVDASRRVRAALESVRLNAFVKTSGGKGLHVVVPIKPRLDWKAVHKATGAMAQAIA
AGDRDTFVANMAKDKRKNRIFIDFHRNARGATAAAPYSLRARPGLPASTPLNWNQLESID
APEELNYSSLPQILNSSGDPWADIDEYASDLEPDR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctcaacacctaccgcggcaagcgggatttttccaagacaccggaaccgtcg
ggccgcgccgcgcagccgggcgggaaccgctacgtcatccacgagcatggcgcgacgtcc
caccactacgacctgcgccttgaactcgatggggtcctcaagagctgggccgtgcccaag
ggcccctcgctcaacccggacgacaagcgcctcgccgtcgagaccgaggatcatccggtc
gaatacctcgacttcgagggggtaatccccgagggcgagtacggcggcgggcccatgatc
gtctgggaccggggcgtctgggcgcccatgggcgatatcgaggaggcgttccgcaccggc
gacttcaagttccgccttgccggcgaaaaactcagtggcggctggatgctcaagcgcctc
aggcccaagcggggcgaggacccggacaaggtcaactggctgttcttcaaggagcacgat
cccgctgcctcgacgagcgagaacatcctcgaaacgcgcccgcaaagcgtcaagtcgggc
ctcactatcgatgaagtgcggcccgcgccgcccaggccgaaaaggccggtcaagctcgaa
cccggcaagctcaagggtgccgtggccgctccgatgccgacgaagatccagccgcaactg
gccacggccatcgccgatccgcctcccgggccgggcgagaagacccgctggctccacgag
atcaagttcgatggctatcgcaccatcgcgttcctcgaagaccgcgaggcgcggctcatc
acccgcgcggggctcgactggaccaaccgctacaggcgtctcgccaataccttcgcccag
attccctgccggcaggcggtgatcgatggcgaggtggtggtggtcggcagcgatggcgtc
accaccttcgccgcgctccaggaggcgctggccgagaaccgcagccacgacctcacgttc
ttcgccttcgaccttctctacctcgatggctacgacctgcggaacgtggcgctgatcgag
cgcaagcagttgctggccgacctgcttggcccgatcatctcgggcaagtcggcgatccag
tacagcgaccatttcgagggagagggggcaggccttctcgcccttgcgaccgagaagggc
ctcgagggcatcgtctccaagcgtgccgatgccagatacgagtcagcgcgcaccaccacc
tgggtcaagaccaaggcgcgcaaggtcggcgacttcctcatcgtcgggttcacccgctcg
gaagcggccgggggcctcggggccctgggcctgggcgaaatggtcgatggcaagctcgaa
tatcgcggcaaggtcggcaccggctttgacgcgcacacgctgggcgaactgctcgaaaag
ctcgagccgcttgtcgccgcgggggcgccgctggcccgcgcgccaaaggatctcgtccgc
gtcgagccggtctattccgcccatgtccacttcgccaaccgcaccaatgacggcagcctg
cgccacgccgtcttcatggggctgatcgagccggaagtcgaaaccaaccggccggagcgc
aagcgcctgatctcggatgccgacctggcctcggtctcgatcaccaatcccacgcggcgc
ctcttcggagacgatggcccgaccaagctcgatctggccgtctattacgggctcgtcggc
gatttcatgctgccgcacatcatggggcggccggtcacgctggtgcgcagcccctcgggc
aaggccgacgacatcttctaccagcgccacccgttctcgggcatgcccaagtcggtgggc
gcgttcgatgccatcaactcggatggcgaggcacggcaatatctcagcgtcgaagatccc
aagggttacctggcgctcgcccagttcggcgtcatcgagttccacacctggggctgccac
catgcgctcctcgaaaagcccgatcgcatcgtcttcgatctcgatccgggcgagggtatc
acctggcgcaatatcgttgacgcgtcccggcgcgtgcgggccgcgctcgaaagcgtgcgg
ctcaatgccttcgtgaaaacgtccgggggcaaggggctgcacgtcgtcgtccccataaag
ccgcggctcgactggaaggccgtgcacaaggccaccggagccatggcgcaggcgatcgcg
gcgggggatcgcgacactttcgtggccaatatggccaaggacaagcgcaagaaccgcatc
ttcatcgacttccaccgcaatgcgcgcggcgcgacggcagcggcgccctatagcctgcgg
gcgcgcccggggctgccggcttcaactcctcttaactggaaccagcttgagtccatcgac
gccccggaagaattgaactactcttctttgcctcaaattctaaatagttccggggatccg
tgggcggatatcgatgagtacgcctcagacctggaacctgatcggtaa
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