Devosia sp. H5989: XM25_16340
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Entry
XM25_16340 CDS
T04003
Symbol
RumA
Name
(GenBank) 23S rRNA (Uracil-5-) -methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
deq03009
]
XM25_16340 (RumA)
Enzymes [BR:
deq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
XM25_16340 (RumA)
Ribosome biogenesis [BR:
deq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XM25_16340 (RumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
PabTrmU54_TRAM_dom
TRM5-TYW2_MTfase
Methyltransf_25
Cons_hypoth95
Methyltransf_15
BpsA_C
Motif
Other DBs
NCBI-ProteinID:
AKR57320
LinkDB
All DBs
Position
complement(3320527..3321720)
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AA seq
397 aa
AA seq
DB search
MSEVAITGIGARGEGIAELAGQRVFVPFTLPGETVEVEVEGDHARLVRLLQPSAERVEPI
CPHFGACGGCQLQHLGPGLYRDFKRGLVELPLRRAGIDTAVGDLVDAQGTGRRRATLHAR
KEGSGYMQARSHQVHDLDRCPILVPGLGKASDICRAIQTAIGECDVAITATRTGLDVAIR
AEKARARPERVAPIAERFNLARLSLNGEMLLLNRMPVVGMGKAQVELPIGSFLQATEAAE
ETLARLVLEPLGKAKSVVDLFCGIGPFALRIAESAKVFAADSDKAGIAALAKAVRNTQGL
KAVTAQVRDLFREPLTQYELGGYDAIVFDPPRAGAEAQARELAKGKVKTIVGVSCDPKTF
ARDSAILIAGGYRLESVTPVDQFAWSTHVELVGVFRR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcgccattaccggaatcggggcgcgcggcgaggggatcgccgagctcgcg
ggccagagagtgttcgtgccgtttacactgcccggcgaaaccgtcgaggtcgaggtggag
ggcgaccatgcgcgcctcgtgcgccttctccagcccagcgccgagcgtgtggaaccgatc
tgcccgcatttcggggcctgtggcggctgccaactccagcatctggggcctgggctctac
agggacttcaagcgcggtctcgtcgaactgccgctacgccgggcgggtatcgacaccgcg
gtcggcgacctcgtcgatgcacaagggacgggccgccggcgggcgacccttcatgcgcgc
aaggagggctcgggctatatgcaggcgcgcagccatcaggtgcacgatctcgatcgctgc
ccgatcctggtgccggggctcggcaaggccagcgatatctgccgggcgatccagaccgca
atcggggagtgcgacgtcgccatcaccgcgacccgcaccgggctcgacgtcgcgatccgt
gccgagaaggcccgggcgaggcccgagcgcgtggccccgatcgcagagaggttcaacctg
gcgcggctctcgctcaacggggagatgctgctgctcaaccgcatgccggtggtcggcatg
ggcaaggcgcaagtcgagttgccgatcggcagctttcttcaggctaccgaggccgccgag
gagacgttggcccggctggtgctcgagccgctgggcaaggccaagtcggtcgtcgatctc
ttttgcggcatcggcccgtttgcattgcgcatcgcggagagcgccaaggtctttgccgcc
gacagcgacaaggcgggtatcgcggccctcgccaaggccgttcgcaatacgcaggggctc
aaggcggtcaccgcgcaggtgcgcgaccttttccgggagccgctgacccagtacgaacta
ggcgggtacgacgccatcgtttttgatcccccgcgcgccggggccgaggcgcaggcccgg
gaactggccaagggcaaggtcaagaccatcgtcggcgtctcatgcgatcccaagacgttt
gcgcgcgactcggcaatcctcatcgcgggcggctatcggctcgagagcgtgacgcctgtc
gatcagttcgcctggtcgacccatgtggagctggtcggggtattccggcgctag
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integrated database retrieval system
