Devosia sp. H5989: XM25_16680
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Entry
XM25_16680 CDS
T04003
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
deq
Devosia sp. H5989
Pathway
deq00240
Pyrimidine metabolism
deq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
XM25_16680
Enzymes [BR:
deq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
XM25_16680
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
ssDBP
Motif
Other DBs
NCBI-ProteinID:
AKR57384
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All DBs
Position
complement(3385928..3386878)
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AA seq
316 aa
AA seq
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MTAKSYLSISPEVKAALAAGKPVVALESTIITHGMPYPQNLSMAQNVEAVIRQNGAVPAT
IAIMDGRFAVGLTSEDLERLALEGGKAAKASRRDVATLLVTGGLAGTTVATTMQIAALAG
IHVFATGGIGGVHRGAEETFDISADLEELSRTPVAVVCAGAKSILDIGKTLEVLETNGVP
VLGYGTDAFPAFWARESGHKVDHRFDDVRDIARVVALQAELGMGGVLVANPIPAKDALEA
SAIEARIAEAIRGAEAEGVSRKDLTPFLLKRIFELTEGKSLAANIALVENNAAVAAQIAV
ALAGQAPKASPQVRRA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccaagtcctatctctcgatcagccccgaagtgaaagcggccctcgccgccggc
aagccggtggtggcgcttgaatccaccatcatcacccacgggatgccttatccgcagaac
ctgtccatggcccagaacgtggaagcggtgatccgccagaacggggcggtgccggccacg
atcgccatcatggacgggcgtttcgcggtgggcctgacgagcgaggacctcgagcggctg
gccctcgaaggcggcaaggccgccaaggcctcgcgccgcgacgtcgccacgctcctcgtc
accggcgggctggccggcacgacggtggccaccaccatgcagatcgccgcgctcgccggc
attcatgtctttgccaccggcggcatcggcggggtgcatcgcggggccgaggaaaccttc
gatatctcggcggacctcgaggagttgtcgcgcaccccggtggcggtggtgtgcgccgga
gccaagtcgatcctcgatatcggcaagacgctcgaagtgctcgagaccaatggcgtaccg
gtgctcggctacggcaccgatgccttccccgccttctgggcgcgtgagagcgggcacaag
gtcgatcaccggttcgatgacgtcagggacatcgcccgggtggtagcgctccaggccgaa
ctgggaatgggcggggtgctggtcgccaatcccattcccgccaaggatgcgctcgaggct
tccgccatcgaggcgcgcatcgccgaggccatcaggggcgcggaggccgaaggggtgtcg
cgcaaggacctgacgccgttcctgctcaagcgcatcttcgagttgaccgagggcaagagc
ctggccgccaatatcgcgctggtcgagaacaacgccgccgtcgccgcccagatcgcggtg
gcgctcgccggccaggcacccaaggcctctccccaggtccgccgcgcatga
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