Devosia sp. H5989: XM25_17345
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Entry
XM25_17345 CDS
T04003
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
deq
Devosia sp. H5989
Pathway
deq00020
Citrate cycle (TCA cycle)
deq00190
Oxidative phosphorylation
deq00650
Butanoate metabolism
deq00720
Other carbon fixation pathways
deq01100
Metabolic pathways
deq01110
Biosynthesis of secondary metabolites
deq01120
Microbial metabolism in diverse environments
deq01200
Carbon metabolism
Module
deq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
deq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
deq_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XM25_17345
00650 Butanoate metabolism
XM25_17345
09102 Energy metabolism
00190 Oxidative phosphorylation
XM25_17345
00720 Other carbon fixation pathways
XM25_17345
Enzymes [BR:
deq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XM25_17345
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AKR57515
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Position
complement(3535780..3537591)
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AA seq
603 aa
AA seq
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MTAYEIIDHEFDVVVVGAGGAGLRATLGMAEQGLNTACVTKVFPTRSHTVAAQGGIAASL
QNMGPDSWQWHMYDTVKGSDWLGDNDAMEYLAREAPAAVYELEHYGVPFSRTEEGKIYQR
PFGGHMTEFGDGPPVQRTCAAADRTGHAILHTLYGQSLRHNAQFFIEYFALDLIMSDDGV
CQGIIAWKLDDGTLHRFRAKMVVLATGGYGRSYFSATSAHTCTGDGNGMVARAGLPLQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLVNSEGERFMERYAPNAKDLASRDVVSRCMTLE
IREGRGVGPKKDHIFLHLDHLDPAVLHERLPGITESAKIFAGVDLTRDPIPVLPTVHYNM
GGIPTNYHGEVLNPAPGAFDRVVPGLMAAGEAACASVHGANRLGSNSLTDLVVFGRAAAL
RAGKVIDRAAPIPGINRAQDEKILARFDKLRYANGNAPTAVLREKMQRTMQEDAAVFRTG
ETLQQGVKRMTEVYGQLKDIKVTDRSMIWNSDLVETLELENLMANAMVTVVSAEARKESR
GAHAREDFPNRDDVEWRKHTLSSIDTDTGVVTLEYRPVHVDPLTPENEGGIPLKKIAPKA
RVY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacggcttatgaaatcatcgaccacgaattcgatgtcgtggttgtcggcgccggcggc
gcgggactgcgcgccacgctgggcatggccgaacagggcctcaacactgcctgcgtcacc
aaggttttcccgacccgctcccacaccgtggccgcccagggcggcattgccgcctcgctc
cagaatatggggcccgacagctggcagtggcacatgtacgataccgtcaagggctcggac
tggctcggcgacaacgacgccatggagtatctcgcccgcgaggctccggccgcggtttac
gagctcgagcactacggcgtgcccttctcgcgcaccgaagaaggcaagatttaccagcgc
ccgttcggcggccacatgaccgaattcggcgacggtcccccggtgcagcgtacctgcgcc
gccgccgaccgcaccggccacgccatcctccacacgctctacggccagtcgctgcgccac
aacgcgcagttcttcatcgagtatttcgccctcgacctcatcatgagcgatgacggcgtc
tgccagggcatcatcgcctggaagctcgacgacggcaccctccaccgcttccgcgccaaa
atggtggtgctggctacgggcggctacgggcgctcgtatttctcggcgacctcggcccat
acctgcaccggcgacggcaacggcatggtggcgcgcgccggcctgccgctccaggatatg
gaattcgtgcagttccaccccaccggcatctatggcgcgggcgtgctcatcaccgagggc
gcgcgcggcgaaggcggatatctggtcaattcggaaggcgagcgcttcatggagcgctat
gcccccaatgccaaggacctggcctcgcgtgacgtggtcagccgctgcatgacgctcgaa
atccgcgaggggcgcggcgtgggtccgaagaaggaccacatcttcctccacctcgaccac
ctcgatccggccgtgctgcacgagcgcctgccgggcatcaccgagagcgccaagatcttt
gccggcgtcgacctcacccgcgatccgattcccgtgctgccgaccgtccactacaacatg
ggcggtatcccgacgaactatcacggcgaagtgctgaacccggctccgggcgcctttgac
cgcgtggtccccggcctcatggccgccggcgaagccgcctgtgcctcggtgcacggcgcc
aatcgcctgggctccaattcgctgaccgacctcgtggtcttcggccgtgccgcggccttg
cgcgcgggaaaagtcatcgaccgcgccgccccgatccccggcatcaaccgggcccaggac
gagaagatcctcgcccgcttcgacaagctccgctacgccaacggcaatgccccgaccgcc
gtgctgcgtgaaaagatgcagcgcaccatgcaggaggacgctgccgtcttccgcaccggc
gaaacgctccagcagggcgtcaagcgcatgaccgaggtttacgggcagctcaaggacatc
aaggtcactgaccgctcgatgatctggaactcggacctggtggaaacgctcgagctcgaa
aacctcatggccaatgccatggtgacggtggtttcggccgaagcgcgcaaggaaagccgc
ggtgcccatgcccgcgaggattttcccaaccgcgacgatgtggaatggcgcaagcacacg
ctgtcctcgattgataccgataccggcgtcgtcaccctcgaataccgcccggtgcatgtc
gatccgctgaccccggaaaacgagggcggcattccgctcaagaagatcgcgcccaaggcg
cgcgtctactaa
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