Devosia sp. H5989: XM25_19500
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Entry
XM25_19500 CDS
T04003
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deq03032
]
XM25_19500
03036 Chromosome and associated proteins [BR:
deq03036
]
XM25_19500
03400 DNA repair and recombination proteins [BR:
deq03400
]
XM25_19500
DNA replication proteins [BR:
deq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XM25_19500
Chromosome and associated proteins [BR:
deq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
XM25_19500
DNA repair and recombination proteins [BR:
deq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
XM25_19500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AKR57931
LinkDB
All DBs
Position
complement(3982260..3982541)
Genome browser
AA seq
93 aa
AA seq
DB search
MIKSELVQKLAEENPHLFQRDIENIVNAILDEVGDAMARGDRVELRGFGAFSVKNRPARV
GRNPRTGEQVDVGEKYVPQFKAGKEIRERLNRE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactcgtacaaaagcttgcggaagaaaacccgcacctgtttcagcgg
gacatcgaaaacatcgtcaacgcgatactcgatgaggtcggcgacgccatggcgcgcggc
gaccgggtcgagctgcgtggctttggcgccttctcggtcaagaaccggccggcgcgcgtc
ggccgcaacccacggaccggcgaacaggtcgatgtcggcgagaaatacgtgcctcagttc
aaggccggcaaggagatccgcgagcgcctgaaccgcgaatag
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integrated database retrieval system
