Devosia sp. H5989: XM25_20220
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Entry
XM25_20220 CDS
T04003
Name
(GenBank) D-ribose transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
deq
Devosia sp. H5989
Pathway
deq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XM25_20220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_20220
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
XM25_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_23
AAA_22
SMC_N
AAA_15
TsaE
AAA_16
MukB
DUF2813
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKR58072
LinkDB
All DBs
Position
4102877..4104382
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AA seq
501 aa
AA seq
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MTNPALTLTGISKSFPGVRALNGVSLELVPGQVTALIGENGAGKSTLVKILTGIYQPDDG
EIAIGGKPVTLPTAHAAFEHGITAIHQETVLFEEMSVAENIFLGHVPRTRLGLIDWGRMR
REARAILDDMGAGHIDEYAPLKDLGIANRHLVGVARAMSIDARIVIMDEPTAALSQKEIE
DLFVLIDLLREDGKAVLFISHKFDEIYRIADRYTVFRDGEMVGKGLIRETSQGEIVRLMV
GRSVDQIFPERTVSIGEPVLTVSDLSHPTEFDAISFELRKGEILGFYGLVGAGRSEVMQA
LFGITRPSRGTIALNGKPVSPRSPAEAVDEGIVYVPEERGKQGVVIGMPIFENVSLPSLG
RTSRNGVLRLAEEFKLARTYTERLDLRASSLSQDVDTLSGGNQQKVVIAKWLATNPEVII
LDEPTKGIDIGSKAAVHEFMGELVAQGLAVIMVSSELPEILGMSDRVVVMREGRMVAEFD
NTGLSAETLVRAAAGIAEQAA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcccgccctgaccttgaccggcatctccaaaagcttccccggcgtgcgcgcg
ctcaacggggtctcgctcgaactcgtccccggccaggtcaccgccctgatcggggagaac
ggcgccggcaaatccacgctggtcaagatcctcaccggtatctaccagcccgatgacggc
gagatcgccatcggcggcaagccggtcacgctccccactgcccatgccgccttcgagcac
ggcatcaccgccatccatcaggagaccgtgctcttcgaggaaatgagcgttgccgagaac
atcttccttggccacgtgccgcgcacccgcctgggccttatcgactggggcaggatgcgc
cgggaggcgcgggcaatcctggacgacatgggcgccggccatatcgacgaatacgccccc
ttgaaggatctcggcatcgccaaccgccatctggtgggcgtcgcacgcgccatgtccatc
gacgcccgcatcgtcatcatggacgagccgaccgccgccttgagccagaaggaaatcgag
gacctcttcgtcctcatcgatctcctgcgcgaggacggcaaggccgtgctcttcatctcg
cacaagttcgacgagatctaccgcatcgccgatcgctataccgtcttccgtgacggcgag
atggtgggcaaggggctcatccgcgagaccagccagggcgagatcgtcaggctcatggtc
ggccgctccgtcgaccaaatcttccctgagcgcaccgtctcgatcggcgagccggtgctc
acggtttcagatctctcgcacccgaccgaattcgacgccatctcgttcgagttgcgcaag
ggcgaaatcctcggtttctacggcctagtcggcgccggccgcagcgaggtcatgcaggcg
cttttcggcatcacccgaccctcgcgcggcaccatcgcgctcaacggcaagccggtctcg
ccgcgctcccccgccgaggcggtggacgagggcatcgtctacgtgcccgaagaacgcggc
aagcaaggcgtcgtcatcggcatgccgatcttcgagaacgtctcgctgccatccctcggg
cgcacctcgaggaacggcgtcctgcggctcgccgaggaattcaagctggcgcgcacctat
accgaacggctcgacctgcgcgcctcttcgctcagccaggatgttgatacgctctcgggc
ggcaaccagcagaaggtggtcatcgccaagtggctggccaccaaccccgaggtcatcatt
ctcgatgagccgaccaagggcatcgatatcggctcgaaagcggccgtgcacgaattcatg
ggggaactggtggcccaggggctcgcggtaatcatggtctcgtccgaacttcccgaaatt
ctgggcatgtccgaccgtgtcgtcgtcatgcgcgaggggcgaatggtggccgagttcgac
aataccggcctttcggccgaaacgctggtgcgcgctgccgccggcatagcggagcaggcg
gcatga
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