Devosia sp. H5989: XM25_20380
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Entry
XM25_20380 CDS
T04003
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deq03016
]
XM25_20380
Enzymes [BR:
deq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XM25_20380
Transfer RNA biogenesis [BR:
deq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XM25_20380
Prokaryotic type
XM25_20380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AKR58103
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Position
complement(4135708..4136445)
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AA seq
245 aa
AA seq
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MARFKLTIEYDGTPFAGWQRQAGQMSVQEAVETAIERFCGEKVAIQAAGRTDSGVHALGQ
VVSFDLSGDRDPFRVREALNYHLKPHPVAVVEAEAVGDDFEARFSATARHYEYRILNRRA
RAALEAGRVWHVPMPLDADAMHAAAQLILGQHDFTTFRAAECQANSPIRTLDVLTVSRQA
DHIVVTAKARSFLHSQVRSMVGSLKLVGEGKWRPADFRAALDAKRRAACGPLAPPDGLYL
TRVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcttcaagctcaccatcgaatatgacggaaccccttttgcggggtggcagcgg
caggccgggcagatgtccgtgcaggaggccgtcgagacggcgatcgagcggttctgcggc
gagaaggtggcgatccaggcggcgggacgcaccgatagcggggtgcacgcgctcggtcag
gtggtgagcttcgacctttcgggcgaccgcgatccgttccgggtgcgcgaggcgctcaac
tatcacctcaagccccatccggtggcggtggtcgaggccgaggcggtgggggacgatttc
gaggcgcggttctcggcgaccgcgcggcactacgagtaccgcatcctcaatcgccgggcg
cgggccgcgctcgaggccgggcgggtgtggcacgtgccgatgccgctcgatgccgatgcc
atgcacgcggcggcgcaactgatcctgggccagcacgatttcaccacgttccgggcggcc
gagtgccaggccaattcacccattcgcacgctcgacgtactgacggtctcccggcaggcg
gaccatatcgtggtaaccgccaaggcgcgcagcttcctccacagccaggtgcgctcgatg
gtgggctcgctcaagctggtgggtgaaggcaagtggcggccggccgatttccgcgccgcg
ctcgatgcaaagcgacgggcggcctgcgggccgctggcgccgccggacgggctctacctc
acgcgcgtggactattag
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