Devosia sp. H5989: XM25_20700
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Entry
XM25_20700 CDS
T04003
Name
(GenBank) peptide ABC transporter substrate-bindingprotein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_20700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_20700
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_20700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKR58163
LinkDB
All DBs
Position
complement(4201990..4203582)
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AA seq
530 aa
AA seq
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MKLFKAALLAAVLTMPMASVATYAATPADVLVVAQNIDDIVSIDPAEAYEFSSGEYVTQT
YDRLVQYDAPDVKTLAPGLATEWTADDANKTITFTLRDGVTFSSGNPLRAEDVVYSFKRV
VMLNKAPAFILTQLGWTPENIDSMVTADGNKVVVKYDGDFSSAFVLNVLAARPASVVDAV
TVQANEKDGDYGNAFLKGASAGSGPFILKAFRPGELINLDANPNYFGGAPAMKSVIIRHV
AEAATQQLLLESGDVDMAKNLTPDQISSLSGKDNVKVETYPQAAVHFLSFNQKDEALTNP
AIWEAARYLVDYKGMTDSFLKGQMEIHQAFWPKGFPGSLDDTPYSYDVEKAKQILADGGV
KTPMTVTLDVINSTPFTDMAQSLQASFAEAGINFEIIPGTGSQVITKYRARTHEGMLLYW
GPDFMDPDSNAKAFAFNEDNSDDNYQSTTTWRNGWAVPAEMNEETKAARAEADPAKRNEM
YIDLQKKVQADSPIVIMFQAATQVAMDKNIEGYVNGATSDFVFYRLVKKN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcttcaaggccgcgctgctcgcggccgtcctgaccatgccgatggcatcggtc
gcgacctacgcggcgactcccgccgacgtgctggtggtggcccagaacatcgacgacatc
gtctcgatcgatccggcggaagcctatgaattctcgtcgggcgaatacgtcacccagacc
tatgaccgcctggtccagtacgatgctccggacgtcaagaccctggcgccgggcctggcc
accgagtggaccgccgacgacgcgaacaagaccatcaccttcaccctgcgtgacggcgtg
acgttctcgtcgggcaacccgctgcgcgccgaggacgtggtctattcgttcaagcgcgtc
gtgatgctcaacaaggctccggccttcatcctgacccagctcggctggaccccggagaac
atcgactccatggtcaccgccgacggcaacaaggtcgtggtcaagtatgacggcgacttc
tcgtccgcgttcgtgctcaacgtgctcgccgcccgccccgcttcggtggtggatgcggtg
accgtgcaggccaacgaaaaggacggcgactacggcaatgcgttcctcaagggcgcctcg
gccggttcgggcccgttcatcctcaaggccttccgcccgggcgagctgatcaacctggac
gccaacccgaactatttcggcggcgccccggccatgaagtcggtgatcatccgtcacgtt
gccgaagccgctacccagcagctgctgctggaatcgggcgacgtcgacatggccaagaac
ctgaccccggaccagatctcgagcctttcgggcaaggataatgtcaaggtcgaaacctac
ccgcaggccgccgtgcacttcctctccttcaaccagaaggacgaagcgctgaccaacccg
gcgatctgggaagcggctcgctacctcgtcgactacaagggcatgacggactcgttcctg
aagggccagatggaaatccaccaggccttctggccgaagggcttccccggctcgctcgat
gacacgccctacagctacgatgtcgaaaaggccaagcagatcctggccgatggcggcgtc
aagactccgatgaccgtcacgctcgacgtcatcaactcgaccccgttcaccgacatggcg
cagtcgctgcaggcttcgttcgccgaggccggcatcaacttcgagatcatcccgggcacc
ggctcgcaggtgatcaccaagtaccgcgcccgaacccacgaaggcatgctgctctactgg
ggcccggacttcatggacccggattcgaacgccaaggccttcgccttcaacgaagacaat
tcggacgacaactaccagtcgaccaccacctggcgtaacggctgggccgttccggccgag
atgaacgaagaaaccaaggctgcacgcgccgaagccgatccggccaagcgcaacgagatg
tatatcgacctgcagaagaaggttcaggccgactcccccatcgtcatcatgttccaggcc
gccacccaggttgccatggacaagaacatcgagggctatgtgaacggagcgaccagcgac
ttcgtcttctaccgcctggtcaagaagaactaa
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