Devosia sp. H5989: XM25_20740
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Entry
XM25_20740 CDS
T04003
Name
(GenBank) gramicidin S biosynthesis grst protein
KO
K09800
translocation and assembly module TamB
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_20740
Transporters [BR:
deq02000
]
Other transporters
Pores ion channels [TC:
1
]
XM25_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AKR58171
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All DBs
Position
4210576..4214895
Genome browser
AA seq
1439 aa
AA seq
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MRRLLAFLLFGLALIVAAPIFAQDQAQPDPEAEKNGFLRFVEDRLSTPDRIIRISNIDGV
LSSDASIGQITIADPEGVWLEINNAKINWNQAALLLGRLEINSLSADSINFLRNSAPPTQ
TNLPAPEAGGLSIPQFPVAINIGKISVPKITFGQQVFGLGSQISLEGALRLDGGSLDTTL
DIVRLDGPGGTLNAKVVYQAGTQNLDLDITLAEPEDGIIANLLNIDGRPDVKLTIAGSGP
VKDLRTDLTFDAGGQRVLSGTATINQAPEGFDVGLDMHGPIATLFADPFKPFFGAESVLS
GRALIRADGGLDLTGIKLSGGQLALNADASTTPDGFLRQLALTAQIASADGSKVLLPVPG
AQTQVGSADLKIDFGAAGSEDWSAVLNVAGFQGKSFATDQLTFKASGVAANLDQPDARRV
TFNGDGTASGITAASPDVQAALGDTIGFGIAGLWNAGQPVRLAQLRIEGKSLDLALSGTI
DDWVYNGDVAIRAANIAPFSDMAGRDLTGALDLTASGTISPLIGGFNLNLDGTGTNLTIG
DETADRLLAGEVRLTGRVARTEQGLETQDFRLGNQQVELTANGNFATGAADFRFDLGLAD
LALLSPDASGALKVTGTAKGQDNNIALNLDANVAQGTLSGRSLQNGTVGFAGTLQEGKLA
GALTGNAFLDGYRIDLAADLSADGETRKVGNLDFSAGGTRLTGNLSQDKAGLLTGQLQLA
SSNISTAAALFLAEATGAANASITLSAADGKQAAAISGTVNGLTTQGIRIGAADIEAKVA
DLFGIPQVQGTLSGSKIVAGGVEVATLQANADLEGSATNFSGQAALVNGTRLDVAGSLAP
LDAGYRLALDRVNLTQGQLSANLAQPAALIVNGDTVTMDAIQFNVGSGRITATGTAGNEL
AIDLNINALPLSVANAVAPDLALSGTLNGTARIGGTRSAPQATFTIAGQGIDAAALRPVG
ISPVSFTTSGSFANNTVRLASLSANGAGGLSISGSGTVPLEGKGLALDLTGSAPLSLANR
FVVDRGGQASGTLSLNARVTGSIASPQFSGQISTRGAQYIDPLTNLRLNNITGTATLTGE
RATINSLTADLATGGSLAVSGSVGLIAPAFTADLALQLNNARYADGDLVVATMTGGLTLK
GPLFQGPLLSGNVLVRQADISIPERIGGSGDVIDVIHKAPPPAVQKTLARAKADVRPGGA
PTPRERPSVMQLDVTINAPNQVFIRGRGLDAELGGSVRLTGPVTNVQPVGSFNLIRGRLS
ILGQRVTFESGSVTLAGNLDPELNLVASTQGDGITVYVTVSGTASNIDVSFTSDPALPQD
EVLARLIFNRSMGELSPLQLARLAGAAAELAGGGGGGLVDSLRNAAGLADLDIVTDAQGN
VAVQAGRYIQDNIYLGVQAGANGQSKVTVNLDITSDLKAKAAVSADGNSSVGVFYEKDY
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
ttgagacggctgcttgcatttttgctgttcggcctggcgctcatcgtcgccgcgccgatc
ttcgcccaggatcaggcccagcctgacccggaagcggaaaagaacggcttcctgcgtttc
gtggaagatcgcctttccacgcccgatcgcatcatccgcatctccaatatcgatggcgtg
ctctcttcggacgcctccatcggccagatcaccattgccgatcccgagggcgtctggctc
gagatcaacaacgccaagatcaactggaaccaggccgcgctcctgctcgggcgcctggag
atcaattcgctctcggccgacagcatcaacttcctgcgcaactcggcacccccgacccag
accaacctgccggcaccggaggcgggcggcctctccattccgcaattcccggtcgccatc
aacatcggcaagatctcggttcccaagatcaccttcggccagcaggtcttcggcctgggc
tcgcagatctcgctcgagggcgccctgcgccttgatggtggctcgctcgacaccacgctc
gatatcgtccgcctcgatggtccgggcggcacgctcaacgccaaggtcgtctaccaggcc
ggcacgcagaacctcgatctcgacatcacgctcgcagaacccgaggacggcatcatcgcc
aacctcctcaatatcgatggccgtcccgatgtgaagctcaccatcgccggctccggcccg
gtcaaggacctgcgcaccgacctcaccttcgatgccggcggccagcgcgtgctctcgggc
acggcgaccatcaaccaggctcccgaaggcttcgatgtcggcctggacatgcatggcccc
atcgccaccctgtttgccgatcccttcaagcccttcttcggcgccgagtcggttctgagc
ggcagggccctcatccgggccgacggcggtctcgatctgaccggcatcaagctctcgggc
ggccagctggcgctcaatgccgacgccagcaccaccccggacggcttcctgcggcaactg
gcgttgaccgcgcagatcgccagcgccgatggtagcaaggtgctcctgcccgtacccggc
gcccagactcaggtcggcagcgccgacctcaagatcgatttcggcgccgccggaagcgag
gactggtccgcggtgctcaatgtcgcgggtttccagggcaagagcttcgccacagaccag
ttgaccttcaaggcctcgggcgtcgcggccaatctcgatcagcccgatgcgcgccgcgtt
accttcaacggcgacggcacggcctccggcattaccgccgccagccccgacgttcaggcg
gcgctgggggataccatcggcttcggcattgccggtctctggaatgccggccagccggtg
cggctggctcagctacgcatcgaaggcaagtccctcgatctggcgctctccggaaccatc
gacgattgggtctataatggcgacgtggccattcgtgccgccaacatcgccccgttctcg
gacatggccggtcgcgacctcaccggcgccctcgacctcaccgccagcggcaccatcagc
ccgctgatcggcggctttaacctcaacctggatggcaccggcaccaacctcaccatcggc
gatgaaaccgccgaccggctgctggccggagaggttcgtcttaccggccgcgtcgcgcgc
accgaacaggggctcgagacgcaggatttccgcttgggcaaccagcaggtcgaactgacc
gccaatggcaattttgccaccggcgcggccgatttccgtttcgacctcggacttgccgat
ctggcgctgctttcgcccgacgccagcggcgccctcaaggtcaccggcaccgccaagggc
caggacaacaacatcgccctcaacctcgatgccaacgtcgcccagggcacgctctccggc
cgcagtctccagaacggaacggtcggctttgcgggtaccctgcaggaaggaaagctcgca
ggcgccttgaccggcaacgccttcctcgatggctatcgcatcgaccttgctgccgacctt
tctgcagatggcgagacacgcaaggtcggcaatctcgatttcagtgccggcggcacgcgg
ctgacgggcaacctctcccaggacaaggccggtcttctcaccggccagctccaactcgct
tcttccaacatctccactgccgctgcgctcttccttgccgaagcgaccggcgcggccaac
gcttcgatcacgctcagcgccgcggacggcaagcaggcggcagccatcagcggcaccgtc
aatgggttgacgacccagggcatcaggatcggcgcggccgacatcgaggccaaggtcgcc
gatctcttcggcatcccccaggttcaggggacgctgagcggcagcaagatcgtcgccggc
ggcgtggaagtcgccacacttcaggccaatgccgatcttgagggcagtgccaccaacttc
tcgggccaggccgctctcgtcaacggcaccaggctcgatgttgccggttccctcgcgccg
ctcgacgccggctaccgcctggccctcgatcgcgtgaacctgacccagggccagctttcc
gccaacctggcccagcccgctgcgttgatcgtcaatggcgacaccgtcaccatggacgcc
atccagttcaatgtcggcagtggccggattaccgcgaccggcacggccgggaacgagttg
gcgattgacctcaacatcaacgccctgccgctctcggtcgccaacgccgtggcgcccgac
ctggcgctctcgggcacgctcaacggcaccgcccggatcggcggcacccgctcggcgccc
caggccaccttcacgatcgccgggcaggggatcgacgcggccgcgctccggcccgtgggt
atttctccggtctccttcaccaccagcggcagctttgccaacaacaccgtgcgcctggcg
agcctttccgccaacggggccggcggcctgagcatttccggcagcggcaccgtcccgctg
gagggcaagggattggcgctggaccttaccggctcggcgcccctcagcctcgccaaccgt
ttcgtggtcgaccgcggcggccaggcgagcggcacgctttcgctcaatgcgcgcgtgacc
ggcagcatcgcctcaccccagttctccggccagatctcgacgcgcggtgcgcaatatatc
gatccgctgaccaatctgcggctcaacaacatcaccggcactgcgaccctcaccggcgaa
cgcgccaccatcaacagcctgaccgctgacctcgccaccggtggctcgctggcggtctcc
ggttcggtcggcctcatcgcgcccgctttcaccgcagacctggcgttgcagctcaacaac
gcgcgctatgccgatggcgatctcgtcgtcgccaccatgacgggtggcctgaccctcaag
ggtccgctgttccaggggccgctcctctccggcaacgtgctggtccgccaggcggatatc
tctatccccgaacgcatcggggggagcggcgacgtcatcgacgtgatccacaaggcgcct
ccaccggcggtccagaaaactctggcgcgcgccaaggccgacgttcggccgggcggcgcg
ccgacgccgcgcgagcggccctccgtcatgcagctcgacgtgaccatcaacgcgcccaac
caggtcttcatccggggtcgcggccttgatgccgagcttggcggctcggtgcgcctcacc
ggtccggtgaccaacgtgcagcccgtcgggtccttcaatctgatccgtgggcgcctatcc
atcctggggcagcgcgtcactttcgagagcggctcggtgaccctggcgggcaatctcgat
ccggagctcaacctcgttgccagcacgcagggcgatggcatcacggtttatgtcaccgtc
tccgggaccgcctccaatatcgatgtgagcttcacctccgatcccgccttgccgcaggac
gaagttctggcccgcctcatcttcaatcgctcgatgggcgaattgtcgccgctccagctt
gcgcggctcgccggcgcggcggccgaactcgccggtggcggcggtggtggcctggtcgac
agcctgcgcaacgccgccggcctcgccgatctcgacatcgtcaccgatgcgcagggcaac
gtcgccgtccaggccggtcgctacatccaggacaatatctacctgggcgtccaggccggt
gccaacggacagagcaaggtcaccgtcaacctcgacatcaccagcgacctcaaggccaag
gcggccgtgagcgccgatggcaattcgagtgtcggcgtcttctacgagaaggactactag
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