Devosia sp. H5989: XM25_21400
Help
Entry
XM25_21400 CDS
T04003
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deq03400
]
XM25_21400
Enzymes [BR:
deq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XM25_21400
DNA repair and recombination proteins [BR:
deq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
XM25_21400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKR58299
LinkDB
All DBs
Position
4350322..4353288
Genome browser
AA seq
988 aa
AA seq
DB search
MSQPKVYSIAPDTPFLPTLAERILDGTLLGDWPRGEDNPFWLSDITIVLPTRRAQLALAR
AFAERGHGLMPDIRTFGGEAPEEEPFLPPIEADPLPQPVSRLERRLILARLIEAWSRTEQ
GAQTLSTPPNAAEILALADSLGQVVDDLNTEQVPASALKALAPDELAENWQRVLGFLNIA
LEAWPAIMDGRGKADASAIRNLRLERQAATAPLVFGERPVIAAGSTGSIPATAHLLGALS
RLPRGALVLPGLDPDLDYEALLRTEEAPHGHPQYGLAQLLRRLGTPPSTVIELGRPGVRA
EVIRQSLALANGTARWAQTRAALLPRMAEAVKGITILGARTADEEARAIALAARDALMAH
KSVGIVSPDRNLARRIAAELLRFELEVDDAAGSPLFHAPAGRLVRQILSLAANGFAPVDL
VALLRSRATVLGLERAQVARLADILETRVLRGRRPGPGLAGIRALVAERREEERLAPLLD
ALETAIAPVCALLESDTRFSAALLARTLAEAFARVAAPGPMPGRSELEAWAEELGGREGE
GPLLPATGLDQVLYKLMAGFEVRNAQPRRDDISIWGQLEARLQSPDLLILAGVNEDIWPE
TADPGPWLSRGMRLAAGLEPPERKQGLAAHDFEMALGNGEVVVAYAQRMGTSPALPSRLL
QRLEAFIGEDAKALREKGRVWLEAARSLDTVVSPRGALRPMPRPPAAARPRRLSVTEIET
LFRSPYDIYAKHVLGLRRLDPLGEEVGVRERGTMIHEVFARFIIEGHDIHGAGALATLNA
MAREAFSGLEAVAERRDIWLRRFEHAARDFLAFERDRDGRIASRHAEVSGEWTFTLLDNF
RLVGIADRLDVLKDGTLEIIDFKTGSVPTPADMRNFDAPQLLLEAAMAREGAFEGMEPRE
SSALIYMKIAAGPEAFKPTDFKPGQGFSLMGAADEVGRRLQRQVTEFLLSDARPMAARIR
PDVTRRYRGTYDHLARNEEWTLLEGDEE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccgaaagtctattccatcgcccccgatacgccgttcctgccgaccctggcc
gaacgcattctcgatggcaccctgctgggcgactggccgcgcggcgaggacaaccccttc
tggctttcagatatcaccatcgtgctgccgacgcggcgcgcccagcttgcgctcgcccgg
gcctttgccgagcgcggccatggcttgatgcccgacatccgcaccttcggcggggaagcg
cccgaagaggagccgttcctgcccccgatcgaggccgatccgctcccccaacccgtgtcg
cgcctcgagcgccgcctgatcctggcccgcctcatcgaagcctggtccaggaccgagcag
ggggcccagacgctctccaccccgcccaacgccgccgaaatcctggcgctcgccgacagc
ctgggacaggtggtggacgatctcaataccgaacaggtgccggcttcggcgctcaaggcg
ctggcgcctgacgaactggccgagaactggcagcgcgtgctcggcttcctcaacatcgcg
ctcgaagcctggccggcgatcatggatgggcgcggcaaggccgatgccagcgccatccgc
aacctgcggctcgaacgccaggccgcgacggcgccgctcgtcttcggcgaacgcccggtg
atcgccgccggctccaccggctcgatcccggccaccgcgcacctgctgggcgccttgagc
cggctgccgcgcggggccctggtgctgcccggcctcgatcccgacctcgattacgaggcc
ctgctcaggaccgaggaagctccgcacggccatccgcaatacgggctggcgcagttgctg
cgccgccttgggacgccgccatcgacggtcatcgagctcgggcggcccggcgtgcgggcc
gaggtgatccggcaatccctggcgctggcgaacggcactgcccgctgggcgcagacccgc
gctgcgctactgccgcgcatggccgaggcggtcaagggcatcacgatcctgggcgcgcgg
acggccgatgaggaagcgcgcgccattgcgttggcggcgcgcgacgccctgatggcgcac
aagagcgtaggcatcgtctcgcccgaccgtaacctggcgcgccggatcgcggccgaactg
ctgcgcttcgagctagaagtggacgacgccgccggctccccgctcttccacgcgcccgcc
ggacgactggtgcgacagatcctcagccttgccgccaacggctttgcacccgtggacctg
gtggcgctgctgcgcagtcgcgccacggtgctggggctcgagcgggcccaggtggcgcgc
ctcgccgacattctcgaaacgcgggtgctgcgcggccggcgtccgggtccggggctcgcc
ggcatccgggcgctcgtcgccgaacggcgcgaggaggagcggctggccccgctcctcgat
gccctcgagacggccatcgccccggtctgcgccctgctcgaaagcgacacgcgcttttcg
gccgcgctcctggcgcgcacgctggccgaggcctttgcccgggtggccgcgcccggcccg
atgccggggcgcagcgaactggaagcctgggccgaagaactcggcggacgcgagggcgag
gggccgctgttgcccgcaaccggactcgaccaggtgctctataagctcatggccggcttc
gaagtgcgcaatgcccagccacggcgcgacgacatctccatctgggggcaactggaagcg
cgcctgcaaagcccggacctgctgatcctggccggcgtcaacgaggacatctggccggaa
actgccgatcccggcccgtggctgagccgcggcatgcggctggcggcgggcctggagccg
cccgagcgcaagcaagggctggccgcccacgacttcgagatggcgttgggcaatggcgag
gtcgtcgtcgcctatgcgcagcgcatgggaaccagccccgccttgccctcgcgcctgctc
cagcggctcgaagccttcatcggcgaggacgccaaggcgctgcgcgagaagggccgggta
tggctggaagcggcacgctcgctcgatacggtggtgagcccgcgcggtgcgctgcgtccc
atgccccgtccgcccgcagcggcacggccgcgccggctctcggtgacggaaatcgaaacc
cttttccgctcgccctacgacatctacgccaagcatgtgctcgggctgcgccgcctcgac
cccctgggcgaggaggtgggggtgcgcgagcgcggtaccatgatccacgaggtcttcgcc
cgcttcatcatcgaaggacacgatatccacggcgccggagcgctcgcaacgctcaacgcc
atggcgcgggaggcgttttcagggctcgaggcagtggccgagcgccgcgatatctggctg
cgccggttcgagcatgcggcccgcgatttcctggccttcgagcgcgaccgcgacgggcga
atcgcatcccgccatgccgaggtttccggcgaatggacgttcaccctcctcgacaatttc
cgcctcgtgggcatcgccgaccggctggacgtgctcaaggacggcacgctcgagatcatc
gatttcaagacaggctcggttcccacaccggctgacatgcgcaatttcgatgccccgcaa
ctgctgctcgaagcggcgatggcgcgggaaggggcgttcgagggcatggagccgcgcgag
agcagcgccctcatctatatgaagatcgccgccggtcccgaagccttcaagcccaccgac
ttcaagccgggccagggcttttcgctcatgggcgcggccgacgaggtggggcggcgattg
cagcgccaagtcaccgaattcctgctttcggatgcccggcccatggccgcccgcatccgc
ccggacgtgacgcgccgctatcgcggcacctatgaccacctggcgcgcaacgaggaatgg
acgctgctcgagggggacgaggaatga
DBGET
integrated database retrieval system
