Devosia sp. H5989: XM25_21755
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Entry
XM25_21755 CDS
T04003
Symbol
PotD
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_21755 (PotD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_21755 (PotD)
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
XM25_21755 (PotD)
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Ortholog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Phage_cement_4
Motif
Other DBs
NCBI-ProteinID:
AKR58369
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Position
4434082..4435122
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AA seq
346 aa
AA seq
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MRNSLVKALALAVSATTMMSAAPAMAQTKTLTISWWGFNGEKLEQYLLAPFREQCGCEIV
FETGNNGERLNKLQIRGGAGVDVAYFSDSFSQQGIEAGLFQKFDASKVPNLANVYDLAKD
PQGGYGPAYTLGRVGIVYDAAKVNPPITSWNDLWRADLAKSLSLPGITTTAGPMVVVKAG
EHQGVDAFADADGAFAGIEALKPNVVKNYNTGSEMINLFSTGEITAAIAQDFTLAQIKAA
VPTVEWADLKEGSIATVNTVNIPVGAAEPELAYQFINFLLSPEIQQKLAEEGVDAPVNKD
VKLTPEQASLWTYGADLIAGLQTVDYAKMNAAKPGWIDRWNEIFGQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaattcactcgtcaaagcgctggcgttggccgtctcggcgaccaccatgatgtcg
gcagcgccggcgatggcccagaccaagacgctgaccatctcctggtggggcttcaacggc
gaaaagctcgagcagtatctgctcgctcccttccgcgaacagtgcggttgcgagatcgtc
tttgagaccggcaacaacggcgagcgtctcaacaagctccagatccgtggcggcgccggc
gtagacgtcgcctatttctcggacagcttctcccaacagggcatcgaggccggcctcttc
cagaagttcgacgcctccaaggtcccgaacctggccaatgtctatgacctcgccaaggat
ccgcagggcggctacggcccggcctacaccctcggtcgcgtcggcatcgtctatgacgcc
gccaaggtgaacccgccgatcacgtcctggaacgatctctggcgcgccgacctcgccaag
tcgctctcgctgcccggcatcaccacgaccgccggtccgatggtggtcgtcaaggctggc
gagcaccagggtgtcgacgccttcgcggatgccgatggcgcctttgccggcatcgaggcc
ctcaagcccaacgtggtcaagaactacaataccggttcggagatgattaatctcttctcg
accggcgagatcactgcggcgatcgcccaggacttcacgctcgcccagatcaaggcagcg
gtcccgaccgttgaatgggccgacctcaaggaaggctcgatcgccaccgtcaacactgtc
aacatcccggtgggtgctgccgaacccgagctggcctaccagttcatcaacttccttctc
tcgcccgaaatccagcagaagctcgccgaggaaggtgtcgacgctccggtcaacaaggac
gtcaagctcacgcccgagcaggcttcgctctggacctatggcgccgacctgatcgcgggc
ctgcagacggtcgactatgccaagatgaacgccgccaagcccggctggatcgatcgctgg
aacgagatcttcggccagtaa
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