Drosophila erecta: 6540695
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Entry
6540695 CDS
T01060
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
der
Drosophila erecta
Pathway
der04512
ECM-receptor interaction
der04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
der00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6540695
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6540695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
der04147
]
6540695
00536 Glycosaminoglycan binding proteins [BR:
der00536
]
6540695
Exosome [BR:
der04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
6540695
Glycosaminoglycan binding proteins [BR:
der00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6540695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
6540695
NCBI-ProteinID:
XP_001968755
UniProt:
B3N4E4
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MLPFWKRLLYAAVIAGALVGADAQFWKTSGTSGSIQDSVKQYRNEPKIPIDDSYDIVDSA
GNLPPKNCTAGYAGCVPKCLAEKGNRGPPGHLGPTGMKGEMGFPGMEGPSGDKGQKGDPG
PYGQRGDKGERGSPGLHGQAGVPGAQGPAGNPGAPGINGKDGCDGEDGIAGLEGLSGMPG
PRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGLPGEKGERGDSGPYG
AKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSLPSKPTHTVMGPRGDTGQKGE
QGRDGRKGEPGLEGETGADGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGL
PGSTGQKGEPGLAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYSGKPGPQGLNGNDG
LPGPQGYTGQKGGAGLPGQNGNEGPPGKKGEKGTAGLNGPKGSIGPIGHAGPPGPEGQKG
EAGMPGYGIQGPKGDAGKPGYPGLKGSKGERGFKGNAGAPGDSKLGRSGPPGLAGAPGQK
GDPGRPGIHGQKGDMGIKGDVGGKCSSCRAGPKGEKGTSGLPGIPGKDGVRGPPGERGYP
GERGHDGINGQTGPPGEKGEDGRSGVPGATGEPGRPAMVDLNSVAAEKGDKGSPGAPGAK
GVKGFSGADGFPGNDGPKGEFGFKGEKGLSGAPGNDGIPGRAGRDGYPGIPGQAIKGEPG
FNGRDGEKGDKGSFGRSGEKGEPGSCEIAELKAIEKGNKGEPGQTGMPGSPGRDGSPGER
GLPGMKGNTGPQGPPGIEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGINGRNGQPGPR
GEPGISRPGPMGPPGLNGLQGEKGERGPTGAIGLPGADGAVGYPGERGDAGLPGIAGRPG
NVGQKGDMGPVGPPGVSGPPGVPGIEGLRGLNGVKGEPGSPGLVGMPGNKGDRGAPGNDG
PKGFAGVTGAPGKRGPAGLTGASGAKGEKGAAGLNGNDGPMGGRGAPGAPGLMGIKGDQG
LAGAPGQPGLDGLPGEKGNQGFPGLDGAPGLPGDASEKGQKGEPGLSGLRGDTGPAGQPG
WPGEKGMPGLAVHGRAGPQGEKGDQGRSGIDGRDGLNGEKGDQGLQGVWGQTGEKGSVGA
PGIPGSPGMDGLPGDAGAPGAVGYPGDRGDKGERGLTGLPGLKGETGPIGLSGFAGAPGP
KGERGIRGQPGPPTIINVEDLRGEKGSQGERGYTGEKGDQGKRGETGQPGYKGAKGDPGL
HGPPGASGLNGIPGDKGDTGPSGEPGYPGVTIKGEKGLPGRTGRNGRQGLVGAPGLIGER
GLPGLPGEPGLVGLPGPIGPAGSKGERGLAGSPGNPGQDGFPGAAGLKGDTGPQGFKGER
GLNGFEGQKGDKGDRGLQGPPGLPGLVGQKGDIGYTGLNGNDGPVGAPGERGLTGPKGRD
GRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGER
GLIGETGNVGRIGPKGERGEQGERGYEGAIGLVGQKGEPGASAGAAFDYLTGILITRHSQ
SESVPTCLPGQTELWTGYSLLFVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNICNY
ASRNDKTFWLTTNAAIPMMPVEKNEIRQFISRCVVCEVPANVIAVHSQTIEVPECPNGWE
SLWIGYSFLMHTAVGNGGGGQALQSTGSCLEDFRATPFIECNGAKGTCHFYDTMTSFWMF
NLDSAPPFERPQQQTMKAGDRQRNVSRCQVCMKNSS
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttctggaagcggctgctatacgccgctgtgatcgcgggagcgttagtcggt
gccgacgctcaattttggaagacgtctggaacgtccggttcgatccaggactcagtgaag
caatatcgaaatgaacccaagatcccaattgacgacagttacgacatcgtagattctgcc
ggtaatctaccgcctaagaattgtacggccggatatgcgggctgtgtgcccaagtgctta
gccgagaagggcaaccggggtccgccgggccatctgggacccacgggaatgaagggcgag
atgggtttccctggtatggagggaccctcaggtgacaagggtcagaagggtgaccccggc
ccatatggacagcgtggtgataagggagaacgcggatcgccgggtcttcatggtcaggct
ggtgtacccggagctcagggacccgccggcaatcccggcgcccctggtatcaacggcaaa
gacggttgcgacggcgaggatggtattgccggcttagagggtctgtccggaatgcccgga
ccacgcggctatgccggccagcttggcagcaagggcgagaagggtgaaccggcgaaggag
aatggtgactatgcgaagggcgagaagggtgagcccggttggaggggcactgccggtttg
gctggacctcagggattacctggcgaaaagggcgagcgcggcgacagcggaccttacgga
gccaaaggaccccggggtgagcacggtctgaagggagagaagggtgcctcctgctacgga
cccatgaagcctggtgcaccgggaatcaagggcgagaagggtgagccggcatcatcgctt
ccaagcaaaccgacgcacacagtaatgggacctcgtggcgatacgggacagaagggagaa
caaggcagagatggccgcaagggtgagcccggattggaaggcgaaactggagccgatgga
cagaagggcgagaagggtctgcccggcggaccaggcgatcgtggtcgccaaggtaacttt
ggacccccaggctctacaggacaaaagggagatcgtggcgagccgggccttaatggcctg
cccggtagtaccgggcagaagggtgagccaggacttgctggagcgacaggtcagccaggt
ctgctcggtcccccgggaccgccaggcggtggacgtggaacaccaggacccccgggcccc
aaaggaccacgcggctatagcggcaaacctggaccccaaggattaaacggaaatgatgga
cttccgggtccacagggatacactggacagaagggaggtgctggtctgcccggacaaaac
ggtaacgaaggacctcctggcaaaaagggcgaaaagggaaccgcaggacttaatggacca
aagggatctattggacccattggacacgcaggaccgccgggaccagagggacagaaaggt
gaggccggtatgcccggttatggcattcaaggacctaagggagatgcaggaaagcctggt
tatcccggactaaagggaagcaagggagagcgcggcttcaagggcaatgctggtgctccc
ggtgactccaagctgggtcgttctggacctcccggtttagctggtgctcctggacaaaag
ggagaccctggtcgtcccggcattcatggccaaaagggagacatgggcatcaagggagat
gtcggcggaaaatgctcatcgtgcagggccggaccaaagggtgaaaagggtacgagtgga
ctgcctggaattcccggaaaggatggcgttcgaggaccgcctggagagcgaggttatccc
ggagaacgtggacacgatggaatcaacggacaaactggaccgcctggtgagaagggagag
gacggtcgctctggtgttcccggagccactggtgagcctggcagacctgcaatggtcgat
ttgaattccgttgcggccgagaagggtgataagggttcccctggcgcgccaggtgccaag
ggcgtgaaaggatttagtggagcagacggctttcctggtaacgatggacccaaaggagaa
ttcggttttaagggcgagaagggtctgagcggagctcccggcaacgacggaatacccgga
cgcgctggacgagacggttaccccggaattcccggccaagccatcaagggcgaaccaggc
ttcaatggaagggacggagaaaagggcgacaagggatcatttggcagaagcggcgagaag
ggagagcccggcagctgtgagattgccgagctaaaggcgatcgaaaagggtaacaagggt
gagcccggccaaaccggcatgccaggaagtcctggaagagacggcagcccgggagagagg
ggcttgcccggaatgaagggcaacactggaccacagggacctcctggcattgaggggccc
cgcggcttgaatgggcctcgcggtgaaaagggcaaccagggagcggtcggagttcctggt
aatcctggcaaggacggccttcgcggcattaatggacgcaatggacagcctggaccgagg
ggagagcctggtatttcgagacccggcccaatgggtccacccggtctaaatggtctgcaa
ggagagaaaggcgaacgcggtccaaccggagccattggtcttcccggagccgatggcgct
gtgggatatcctggagaaagaggcgatgctggtctgcccggaatcgctggacgacctgga
aatgttggacagaagggcgacatgggcccggtcggcccccctggtgtttccggacctcct
ggtgttcctggtattgagggtttgcgtggacttaatggcgtcaagggtgaacctggaagt
cccggactggtcggcatgcccggcaacaaaggtgaccgtggcgctcctggaaatgacgga
cccaagggctttgctggcgttactggtgcgcccggaaagcgcggaccagctggtttaact
ggagcttccggtgccaagggtgaaaagggagctgctggcttgaatggcaacgatggacct
atgggtggccgcggtgctcccggtgctcctggtttgatgggcattaagggcgaccaagga
ttggcaggtgcccctggacaaccaggactggacggtttgcctggcgaaaagggtaaccag
ggattccccggtttggatggagctcctggtttgcctggtgacgcctccgagaagggacaa
aagggtgagcccggactatctggactccgtggcgatacaggtccggctggacagcccggt
tggccaggcgagaagggtatgcccggtctagctgttcacggacgtgctggtccgcagggc
gaaaagggagaccagggacgcagtggaatcgatggacgcgatggactcaacggcgagaag
ggtgatcaaggtctgcagggcgtttggggacagaccggcgagaagggatctgtgggagca
cccggtattcctggttctcccggaatggatggcttgcccggcgacgctggtgcccctggt
gctgtcggctatcctggcgatcgcggtgacaagggagagcgtggtctaactggtctgccc
ggacttaagggtgagactggtcccattggactgtcgggcttcgcgggtgctcctggtccc
aagggtgagcgcggtattcgtggtcagcccggtcctccgaccatcatcaacgtggaagac
ctccgtggtgaaaagggttcccaaggcgagcgcggctacaccggcgaaaagggtgatcaa
ggcaaacgaggcgagactggtcagcctggctacaaaggagcaaagggagatcccggattg
catggtccacctggtgcaagcggattaaatggtattcctggcgacaagggagacactggt
ccaagcggcgagcccggttatcctggagttaccattaagggcgagaagggtctacccggt
cgaacaggtagaaacggacgtcaaggtcttgttggagcccccggtttaattggagaacgt
ggtctgccaggcttgcctggagagcctggcctcgtcggtctacctggacccattggacca
gctggcagcaagggagagcgtggtctggccggcagccccggaaacccaggacaggatggc
tttcctggcgcagccggattgaagggagatacgggaccgcaaggctttaagggagaacgt
ggtctaaatggcttcgagggacaaaagggagacaagggtgaccgaggactccaaggaccg
cctggactgcccggcttggtcggacagaagggtgacattggctacactggcttgaatgga
aacgatggacctgtcggcgctccaggcgagcgtggcctcaccggacccaagggacgcgat
ggacgtgacggaacaccaggtctgcctggacaaaagggtgaaccgggaatgctgccaccg
ccaggacccaagggcgaacctggtcagcctggacgtaatggaccaaagggagaacccgga
cgtccaggagagcgtggcttgattggcatccagggtgagcgtggcgagaagggtgagcgc
ggcctgatcggtgagactggcaacgtgggccgaatcggaccgaagggagaacgcggagag
cagggcgagaggggttacgagggcgccattgggttggtcggccagaagggtgagcccggt
gcttctgccggcgccgcttttgactacctcaccggcatcctgattacgcgacacagtcaa
tcggaatcggtgccgacgtgtttgcctggacaaacggaactctggactggctactccctg
ttgttcgtcgatggcaatgactatgcccacaaccaggatctcggatctcccggatcctgt
gtgccacgattctcaacgctgcccgttctatcttgtggtcagaacaacatctgcaactac
gcttcgaggaatgacaagaccttctggttgacaaccaacgctgccattccaatgatgccc
gtcgaaaagaacgagatccgtcagttcatctcacgttgcgtcgtctgtgaggtgccggct
aatgtgatcgccgtgcacagtcaaacgatagaggtacccgaatgtccgaatggctgggag
agtctctggatcggctacagtttcctcatgcacactgccgtgggcaacggtggcggtgga
caggcgctgcaatcgactggctcctgcttggaggacttccgcgctacgcccttcatcgag
tgcaacggcgccaagggcacgtgccacttctacgatacgatgaccagcttctggatgttc
aacctggacagcgcaccgccgttcgagaggccccagcagcagacgatgaaggccggcgat
cggcagcgcaatgtgtccaggtgccaggtgtgcatgaagaactcctcgtag
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