Drosophila erecta: 6540695
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Entry
6540695 CDS
T01060
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
der
Drosophila erecta
Pathway
der04382
Cornified envelope formation
der04512
ECM-receptor interaction
der04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
der00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6540695
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6540695
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
6540695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
der04147
]
6540695
00536 Glycosaminoglycan binding proteins [BR:
der00536
]
6540695
Exosome [BR:
der04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
6540695
Glycosaminoglycan binding proteins [BR:
der00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6540695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
6540695
NCBI-ProteinID:
XP_001968755
UniProt:
B3N4E4
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MLPFWKRLLYAAVIAGALVGADAQFWKTSGTSGSIQDSVKQYRNEPKIPIDDSYDIVDSA
GNLPPKNCTAGYAGCVPKCLAEKGNRGPPGHLGPTGMKGEMGFPGMEGPSGDKGQKGDPG
PYGQRGDKGERGSPGLHGQAGVPGAQGPAGNPGAPGINGKDGCDGEDGIAGLEGLSGMPG
PRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGLPGEKGERGDSGPYG
AKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSLPSKPTHTVMGPRGDTGQKGE
QGRDGRKGEPGLEGETGADGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNGL
PGSTGQKGEPGLAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYSGKPGPQGLNGNDG
LPGPQGYTGQKGGAGLPGQNGNEGPPGKKGEKGTAGLNGPKGSIGPIGHAGPPGPEGQKG
EAGMPGYGIQGPKGDAGKPGYPGLKGSKGERGFKGNAGAPGDSKLGRSGPPGLAGAPGQK
GDPGRPGIHGQKGDMGIKGDVGGKCSSCRAGPKGEKGTSGLPGIPGKDGVRGPPGERGYP
GERGHDGINGQTGPPGEKGEDGRSGVPGATGEPGRPAMVDLNSVAAEKGDKGSPGAPGAK
GVKGFSGADGFPGNDGPKGEFGFKGEKGLSGAPGNDGIPGRAGRDGYPGIPGQAIKGEPG
FNGRDGEKGDKGSFGRSGEKGEPGSCEIAELKAIEKGNKGEPGQTGMPGSPGRDGSPGER
GLPGMKGNTGPQGPPGIEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGINGRNGQPGPR
GEPGISRPGPMGPPGLNGLQGEKGERGPTGAIGLPGADGAVGYPGERGDAGLPGIAGRPG
NVGQKGDMGPVGPPGVSGPPGVPGIEGLRGLNGVKGEPGSPGLVGMPGNKGDRGAPGNDG
PKGFAGVTGAPGKRGPAGLTGASGAKGEKGAAGLNGNDGPMGGRGAPGAPGLMGIKGDQG
LAGAPGQPGLDGLPGEKGNQGFPGLDGAPGLPGDASEKGQKGEPGLSGLRGDTGPAGQPG
WPGEKGMPGLAVHGRAGPQGEKGDQGRSGIDGRDGLNGEKGDQGLQGVWGQTGEKGSVGA
PGIPGSPGMDGLPGDAGAPGAVGYPGDRGDKGERGLTGLPGLKGETGPIGLSGFAGAPGP
KGERGIRGQPGPPTIINVEDLRGEKGSQGERGYTGEKGDQGKRGETGQPGYKGAKGDPGL
HGPPGASGLNGIPGDKGDTGPSGEPGYPGVTIKGEKGLPGRTGRNGRQGLVGAPGLIGER
GLPGLPGEPGLVGLPGPIGPAGSKGERGLAGSPGNPGQDGFPGAAGLKGDTGPQGFKGER
GLNGFEGQKGDKGDRGLQGPPGLPGLVGQKGDIGYTGLNGNDGPVGAPGERGLTGPKGRD
GRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGER
GLIGETGNVGRIGPKGERGEQGERGYEGAIGLVGQKGEPGASAGAAFDYLTGILITRHSQ
SESVPTCLPGQTELWTGYSLLFVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNICNY
ASRNDKTFWLTTNAAIPMMPVEKNEIRQFISRCVVCEVPANVIAVHSQTIEVPECPNGWE
SLWIGYSFLMHTAVGNGGGGQALQSTGSCLEDFRATPFIECNGAKGTCHFYDTMTSFWMF
NLDSAPPFERPQQQTMKAGDRQRNVSRCQVCMKNSS
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttctggaagcggctgctatacgccgctgtgatcgcgggagcgttagtcggt
gccgacgctcaattttggaagacgtctggaacgtccggttcgatccaggactcagtgaag
caatatcgaaatgaacccaagatcccaattgacgacagttacgacatcgtagattctgcc
ggtaatctaccgcctaagaattgtacggccggatatgcgggctgtgtgcccaagtgctta
gccgagaagggcaaccggggtccgccgggccatctgggacccacgggaatgaagggcgag
atgggtttccctggtatggagggaccctcaggtgacaagggtcagaagggtgaccccggc
ccatatggacagcgtggtgataagggagaacgcggatcgccgggtcttcatggtcaggct
ggtgtacccggagctcagggacccgccggcaatcccggcgcccctggtatcaacggcaaa
gacggttgcgacggcgaggatggtattgccggcttagagggtctgtccggaatgcccgga
ccacgcggctatgccggccagcttggcagcaagggcgagaagggtgaaccggcgaaggag
aatggtgactatgcgaagggcgagaagggtgagcccggttggaggggcactgccggtttg
gctggacctcagggattacctggcgaaaagggcgagcgcggcgacagcggaccttacgga
gccaaaggaccccggggtgagcacggtctgaagggagagaagggtgcctcctgctacgga
cccatgaagcctggtgcaccgggaatcaagggcgagaagggtgagccggcatcatcgctt
ccaagcaaaccgacgcacacagtaatgggacctcgtggcgatacgggacagaagggagaa
caaggcagagatggccgcaagggtgagcccggattggaaggcgaaactggagccgatgga
cagaagggcgagaagggtctgcccggcggaccaggcgatcgtggtcgccaaggtaacttt
ggacccccaggctctacaggacaaaagggagatcgtggcgagccgggccttaatggcctg
cccggtagtaccgggcagaagggtgagccaggacttgctggagcgacaggtcagccaggt
ctgctcggtcccccgggaccgccaggcggtggacgtggaacaccaggacccccgggcccc
aaaggaccacgcggctatagcggcaaacctggaccccaaggattaaacggaaatgatgga
cttccgggtccacagggatacactggacagaagggaggtgctggtctgcccggacaaaac
ggtaacgaaggacctcctggcaaaaagggcgaaaagggaaccgcaggacttaatggacca
aagggatctattggacccattggacacgcaggaccgccgggaccagagggacagaaaggt
gaggccggtatgcccggttatggcattcaaggacctaagggagatgcaggaaagcctggt
tatcccggactaaagggaagcaagggagagcgcggcttcaagggcaatgctggtgctccc
ggtgactccaagctgggtcgttctggacctcccggtttagctggtgctcctggacaaaag
ggagaccctggtcgtcccggcattcatggccaaaagggagacatgggcatcaagggagat
gtcggcggaaaatgctcatcgtgcagggccggaccaaagggtgaaaagggtacgagtgga
ctgcctggaattcccggaaaggatggcgttcgaggaccgcctggagagcgaggttatccc
ggagaacgtggacacgatggaatcaacggacaaactggaccgcctggtgagaagggagag
gacggtcgctctggtgttcccggagccactggtgagcctggcagacctgcaatggtcgat
ttgaattccgttgcggccgagaagggtgataagggttcccctggcgcgccaggtgccaag
ggcgtgaaaggatttagtggagcagacggctttcctggtaacgatggacccaaaggagaa
ttcggttttaagggcgagaagggtctgagcggagctcccggcaacgacggaatacccgga
cgcgctggacgagacggttaccccggaattcccggccaagccatcaagggcgaaccaggc
ttcaatggaagggacggagaaaagggcgacaagggatcatttggcagaagcggcgagaag
ggagagcccggcagctgtgagattgccgagctaaaggcgatcgaaaagggtaacaagggt
gagcccggccaaaccggcatgccaggaagtcctggaagagacggcagcccgggagagagg
ggcttgcccggaatgaagggcaacactggaccacagggacctcctggcattgaggggccc
cgcggcttgaatgggcctcgcggtgaaaagggcaaccagggagcggtcggagttcctggt
aatcctggcaaggacggccttcgcggcattaatggacgcaatggacagcctggaccgagg
ggagagcctggtatttcgagacccggcccaatgggtccacccggtctaaatggtctgcaa
ggagagaaaggcgaacgcggtccaaccggagccattggtcttcccggagccgatggcgct
gtgggatatcctggagaaagaggcgatgctggtctgcccggaatcgctggacgacctgga
aatgttggacagaagggcgacatgggcccggtcggcccccctggtgtttccggacctcct
ggtgttcctggtattgagggtttgcgtggacttaatggcgtcaagggtgaacctggaagt
cccggactggtcggcatgcccggcaacaaaggtgaccgtggcgctcctggaaatgacgga
cccaagggctttgctggcgttactggtgcgcccggaaagcgcggaccagctggtttaact
ggagcttccggtgccaagggtgaaaagggagctgctggcttgaatggcaacgatggacct
atgggtggccgcggtgctcccggtgctcctggtttgatgggcattaagggcgaccaagga
ttggcaggtgcccctggacaaccaggactggacggtttgcctggcgaaaagggtaaccag
ggattccccggtttggatggagctcctggtttgcctggtgacgcctccgagaagggacaa
aagggtgagcccggactatctggactccgtggcgatacaggtccggctggacagcccggt
tggccaggcgagaagggtatgcccggtctagctgttcacggacgtgctggtccgcagggc
gaaaagggagaccagggacgcagtggaatcgatggacgcgatggactcaacggcgagaag
ggtgatcaaggtctgcagggcgtttggggacagaccggcgagaagggatctgtgggagca
cccggtattcctggttctcccggaatggatggcttgcccggcgacgctggtgcccctggt
gctgtcggctatcctggcgatcgcggtgacaagggagagcgtggtctaactggtctgccc
ggacttaagggtgagactggtcccattggactgtcgggcttcgcgggtgctcctggtccc
aagggtgagcgcggtattcgtggtcagcccggtcctccgaccatcatcaacgtggaagac
ctccgtggtgaaaagggttcccaaggcgagcgcggctacaccggcgaaaagggtgatcaa
ggcaaacgaggcgagactggtcagcctggctacaaaggagcaaagggagatcccggattg
catggtccacctggtgcaagcggattaaatggtattcctggcgacaagggagacactggt
ccaagcggcgagcccggttatcctggagttaccattaagggcgagaagggtctacccggt
cgaacaggtagaaacggacgtcaaggtcttgttggagcccccggtttaattggagaacgt
ggtctgccaggcttgcctggagagcctggcctcgtcggtctacctggacccattggacca
gctggcagcaagggagagcgtggtctggccggcagccccggaaacccaggacaggatggc
tttcctggcgcagccggattgaagggagatacgggaccgcaaggctttaagggagaacgt
ggtctaaatggcttcgagggacaaaagggagacaagggtgaccgaggactccaaggaccg
cctggactgcccggcttggtcggacagaagggtgacattggctacactggcttgaatgga
aacgatggacctgtcggcgctccaggcgagcgtggcctcaccggacccaagggacgcgat
ggacgtgacggaacaccaggtctgcctggacaaaagggtgaaccgggaatgctgccaccg
ccaggacccaagggcgaacctggtcagcctggacgtaatggaccaaagggagaacccgga
cgtccaggagagcgtggcttgattggcatccagggtgagcgtggcgagaagggtgagcgc
ggcctgatcggtgagactggcaacgtgggccgaatcggaccgaagggagaacgcggagag
cagggcgagaggggttacgagggcgccattgggttggtcggccagaagggtgagcccggt
gcttctgccggcgccgcttttgactacctcaccggcatcctgattacgcgacacagtcaa
tcggaatcggtgccgacgtgtttgcctggacaaacggaactctggactggctactccctg
ttgttcgtcgatggcaatgactatgcccacaaccaggatctcggatctcccggatcctgt
gtgccacgattctcaacgctgcccgttctatcttgtggtcagaacaacatctgcaactac
gcttcgaggaatgacaagaccttctggttgacaaccaacgctgccattccaatgatgccc
gtcgaaaagaacgagatccgtcagttcatctcacgttgcgtcgtctgtgaggtgccggct
aatgtgatcgccgtgcacagtcaaacgatagaggtacccgaatgtccgaatggctgggag
agtctctggatcggctacagtttcctcatgcacactgccgtgggcaacggtggcggtgga
caggcgctgcaatcgactggctcctgcttggaggacttccgcgctacgcccttcatcgag
tgcaacggcgccaagggcacgtgccacttctacgatacgatgaccagcttctggatgttc
aacctggacagcgcaccgccgttcgagaggccccagcagcagacgatgaaggccggcgat
cggcagcgcaatgtgtccaggtgccaggtgtgcatgaagaactcctcgtag
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