Drosophila erecta: 6541377
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Entry
6541377 CDS
T01060
Name
(RefSeq) THO complex subunit 2 isoform X2
KO
K12879
THO complex subunit 2
Organism
der
Drosophila erecta
Pathway
der03013
Nucleocytoplasmic transport
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6541377
09122 Translation
03013 Nucleocytoplasmic transport
6541377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6541377
03041 Spliceosome [BR:
der03041
]
6541377
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
6541377
Spliceosome [BR:
der03041
]
Complex C
Other components
EJC/TREX
6541377
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6541377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Chs7
TMEM215
TPR_19
Motif
Other DBs
NCBI-GeneID:
6541377
NCBI-ProteinID:
XP_001968356
UniProt:
B3N9F8
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MQRSTDRIRRLKKLKSVTGPKDGGGSGDAAATAENRTSASSDTNGGAASSGAGGKEPGTL
NPEVFKHLDKSGRSEFLKYLKQQLQDAADTPVYDKNGVFKQGISNAIYQLLWQALRFTHK
KDIVLHLLLEVVPLHADFPSLIVDVVNILDSETSLITDGFQEERHAFVQLVKDLDKVVPE
SLLKERLEIDTLQEVGIVKNKSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQ
EFDESTTPESIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWNLFIPLLRSYMPTGAI
ICEVLGYKFCHFKDSRTPRSLYHVCALLLKHDVITLNDVYVWLTPNDGSIKADWEEELAD
AREMVRKLNLIQTNKKEDEKDPPPPPTVKKFNEEKYNANQKFGLCEALLKVGDWENASKI
IQKLPEQAVVLQEPIARAIADLIHLSVENIYYKKCFKAPAGRRQSRNRLYDDSKLVAKMQ
AREFSDLRKYTWPMANVLGPAMHYDTVLMYKLIRIMRKLVIDMGVDSLNGPPPNSEAEQH
YYDIMSSLDACILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQMHPNLI
RRCGLAQRDIKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQIYDNLIGPVCD
MLKYLTALSFDCLGYCIIESLTLTGRLRFKDDGTSLSLWLQSLASFCGTIYKKYSIELSG
LLQYVANQLKSQKSLDLLILREIVHKMAGVESCEEMTNDQLQAMCGGEQLRGEAGYFSQV
RNTKKSSNRLKEALANNDLAVAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLV
QFGTFLGSTYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKADP
NAKKLTTTQKLQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFWSLSMYDLHVP
NESYQREIAKLKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKISQR
LQEQKDSWFLLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHAIHNLKTSNFS
TLLCYDRIFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVT
KFRVSNQFSEANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPH
YPVLAKLAQIIERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKESVFHQIAERP
NKESPTNASASAAPIRSDKVSPTSPSAHTQGTRATSGAAPFYSNEQKSGNKEPETKAAST
TRESKSQKGEGNTVTLVSTATSTASNSERESKQRDLPAPRESQSRSKDDQQEQANNGSNG
NRQSESRNRDVDRDRQDQHDQRSISTHRSSRDPVRVKERTEAEQHQRSRERLMEELEAQQ
RKREKQTRRGGEERNRHGDGVETVDLVGSTDNRHYEEFEGRMRDLSSVSNESNGSMQHRQ
RSHETIEFEKDSKRRKLESSTSSSKKVEELVDSVKKARGLKTKERNRDKLSDEERDARKD
RKLGRKRDRVEESNSNEHKRRREAQNGEEELRDRDRHREKSPRERSHEKFDRERGGASGS
RGEERQYISKSTRSSRVNY
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatccacagaccggatacgccggctgaagaagctgaagagcgttacgggacca
aaggatggcggtggaagcggcgatgctgcggcgacggcggaaaaccggacctccgcatcg
tcggacacgaacggaggagccgccagcagcggagccggcggcaaggagcctggcacactg
aatccggaggtcttcaagcacctcgacaaatccggacgcagcgaattcctgaagtacctc
aagcagcagttacaggatgcggcggatacgcccgtctacgacaagaacggcgtcttcaag
cagggcatctccaatgccatctaccagcttctctggcaggccctgcgcttcacccacaaa
aaggacatagtactccacctgctcctggaagtcgtgcccctccatgcggactttcccagc
cttatagtagacgtggttaacattctggacagcgaaacctccctcataaccgatggattt
caggaagaacgacatgcctttgtgcaacttgttaaggacctggataaggtggttccagaa
agtcttttaaaagagcgattggaaatcgataccctgcaggaggtgggaatcgtcaagaat
aaaagcttctactccaagttcatcaaggtcaaaaccaagttatactataagcagcgtcgg
tttaatcttttccgcgaggagagcgaagggttcgccaagcttatcacagagctaaaccag
gagttcgacgagagcaccacccctgagagcataatggatatcataaaatcccttataggt
tgctttaatctggatccgaatcgcgtgttggacattattattgagtcctttgaaactcgt
ccggatcgatggaacttgtttatccccctgctgcgcagctacatgcccactggtgccatt
atttgcgaggtcctcggatataagttctgccactttaaggactctcgcacgccccgctcg
ttataccatgtttgtgctcttttgcttaagcacgacgtcatcacgctgaacgatgtatac
gtgtggttgactccgaacgatggcagcataaaggcggactgggaggaagagctggcggat
gccagggaaatggtccgcaagctgaaccttatccaaaccaacaagaaggaagacgaaaag
gatccaccaccgcctcccacggttaagaagttcaacgaggaaaaatacaatgctaaccaa
aagtttggtctctgcgaggctctgcttaaagttggcgactgggaaaatgcgtctaagatc
atccagaagcttcccgaacaggctgtagtactgcaggaacccattgcccgtgccattgcc
gatcttattcacctgtccgtggagaatatctactacaagaagtgctttaaggctcccgct
ggacgaagacaaagccgaaatcggttgtatgacgattccaagttggtggccaagatgcag
gcaagggaattcagcgacttaaggaagtacacttggccgatggctaatgttttgggacct
gccatgcactacgacactgtgctaatgtacaagctaatccgtatcatgcggaagcttgta
atcgatatgggcgtagacagcctaaatggtcctccgccgaattcggaggcagagcagcac
tactatgacattatgagctcgctggatgcctgcattctaccctcccttctctatctagac
aacaactgctccatgtccgaagagatttgggctgtgctcaagtatttcccgtatcatttt
cgctacagtttgtatgcgcgttggaagaacgacagctaccagatgcatcccaatttgatc
aggcgatgtggattggcacagagggatatcaaggcgctaatgaagcgcgtcagcaaggag
aacgtcaagcagttgggacgtctggtaggaaagtacagccattgtgccccaggactgctg
ttcgactatattctcttgcaaattcaaatctatgacaatctaattgggccagtctgcgac
atgcttaagtatcttactgccttgtcctttgactgtttgggatactgcatcatcgagtcc
ttgactttaacgggtcgtctcaggttcaaggatgatggcacgtcgttatccttgtggctg
caaagtcttgcctccttttgcggcaccatctacaagaagtacagcattgagctgagtggg
ttgcttcagtatgtggccaatcagctgaaatcgcagaagagcctggacttactgattttg
agagagatcgtgcataaaatggcaggcgtggagtcctgcgaggagatgactaatgatcag
ttgcaagccatgtgtggcggagaacagctcaggggagaggctggctactttagtcaagtg
aggaacacgaaaaagtcatcaaatcgcctgaaggaggccttggccaacaatgatcttgcc
gtggccatttgccttttgatggctcaacagaagcactgcgtcatttatcgtgagacggcg
gcgcacagccatttgaagttggtgggaaatctgtatgatcagtgccaggacacactcgtc
cagtttggtacttttctaggctccacctattctgtggatgagtatgtggagcggttaccc
tcgattattaccatgctccgagagtaccacataaacacagatgtcgcctttttcttggct
aggcccatgttcacgcatcagatcaatcaaaaatacgatcaattgcgcaaagctgatccc
aatgccaagaagcttaccacgacgcaaaagctgcaaaagtatttggaagccacgcagctg
atcatgaaccccattgtagagtctgttcgtccgctgcacagctccaaggtgtgggaggac
attagtccgcagtttctggtaactttttggagtctgagcatgtacgatctgcacgtgccg
aacgaaagctatcagagggagattgccaagctgaaacaactggcccagcaagcggcagaa
ggcaaagactctaaccaatcaaagaacaagaaggagcaggagcgctacattgcgctaatg
gagaagctgaacgacgagcgtaaaaagcagcatgagcacgtcgacaagatctcgcagcgg
ttgcaggagcaaaaagatagttggttccttctacgatctgccaagtccgcaaagaacgac
accatcacgcagttcctgcagctctgcctcttcccgcgttgcacctttaccgctctggat
gcgctatattgcgcgaagttcgtgcacgccatccacaacctcaagacatcgaacttctct
accctactgtgctacgataggatcttttgtgacatcacttattcggttacttcgtgcact
gagggcgaggctacgcggtacggacgctttttgtgcgccatgctcgagaccgtgatgcgt
tggcatgcggatcaggcggtgtttaataaggagtgcgccaattatcctggttttgtgacc
aagtttcgtgttagcaatcaattctcagaggccaacgatcacgttggctacgaaaactat
cggcatgtgtgtcacaagtggcactacaagattaccaaggcgattgtattttgtttggac
tcgaaggactttatgcagatcagaaatgcactgatcatcctaatgcgaatactgcctcac
tatccagttcttgccaaactggcgcaaatcatcgagcgtaaggtggacaaggtccgcgag
gaggagaagacaaagcgaccggatctgtatgccattgcctccagctacattggccagctg
aagctgaagactccccacatgctgaaggagagtgtctttcatcaaattgccgagcggccg
aataaggagtcgccgaccaatgctagcgcttctgccgcacccatcagatccgataaagtg
tcacccacctctccatctgcacatacccaaggaacaagggctaccagcggagctgcccca
ttctacagcaacgaacaaaagtcaggcaacaaagaaccagaaacaaaagcagcttccaca
acgcgcgaatcaaagagccaaaaaggcgagggcaataccgtcaccttggtgtccacagcc
acttcaacggcatccaacagtgaacgcgagagcaaacaacgtgatctgcccgcgccacgc
gagtcccaatcacgcagcaaggatgaccagcaggagcaggcaaacaacggcagcaatggt
aacagacagagcgagagccgtaatcgggatgtggatcgagacagacaggatcagcacgac
cagcgaagcattagtacccatcgcagttccagagacccggtgcgggtcaaggagcgcaca
gaagccgaacagcatcagaggtcgcgggaacgtctcatggaggagttggaagcgcagcag
cggaagcgcgaaaagcaaacgcgacgcggcggcgaagagcgcaaccggcatggggatggc
gtcgaaacggtggacttggtgggcagcaccgataatcgtcactacgaggagttcgagggg
cggatgagggacttgagctcagtgtccaacgaaagcaacggttcgatgcagcatcggcaa
cgtagccatgagaccattgaattcgaaaaagattcaaagcgtcgcaaattggagtcgtca
accagcagttcaaagaaggtggaggaactggtggacagcgtaaagaaggcgcgcggcctc
aagaccaaagagcgcaacagggacaagctgtcggatgaggagcgggatgctcgcaaggat
cgcaagttggggcgcaagcgcgatcgcgtcgaagagtccaatagcaacgaacacaagcgc
cgacgcgaagcacaaaatggtgaagaagaactgcgggatagagatcgtcatagggaaaag
tcaccgcgggagcgatcacacgagaaattcgatagagaaagaggaggagccagcggctcg
cggggcgaggaacggcagtacatcagcaagtccacccggtcctccagagtcaactattga
DBGET
integrated database retrieval system
