Drosophila erecta: 6542119
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Entry
6542119 CDS
T01060
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6542119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6542119
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6542119
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6542119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
TORC_N
Motif
Other DBs
NCBI-GeneID:
6542119
NCBI-ProteinID:
XP_026835493
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNTNQKQKHLQEKYEADLKKEIKKL
QRLRDQIKSWIASAEIKDKSSLLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMD
PAQRIKDDARNWLTSSISSLQIQIDQYESEIESLLAGKKKRLDRDKQERMDDLRGKLDRH
KFHITKLETLLRLLDNDGVEAEQVNKIKDDVEYYIDSSQEPDFEENEFIYDDIIGLDEVE
LSGTATTDSNNSNETSGSPSSVTSGGSPSQSPVTVQQILNTSSQGAASSGSSAASAALFQ
QQLTAAQSNGNNVGYASDTSAASSSATTSTDPAGGTIAINYVGGLGDKRNKSSESNTLKL
KLQPHQLVKPTPVRATAKLPQSSDTQVNKIVSSTPSKNQQQLPTAASIVAASAMQSQNSS
SGSGSCNSTVGTGASQSTSSGNNPAVQPNAPTPGQSSTVIAAAAASSNVVSAPIVSSANV
QGPSVIQSTPTIAFAAVAKHNTSLLENGPVLQQQLAVTPTVAAIVGAGTQAQQKHVQPLS
NLQTNSPHIQNGLPVSDSNNDTSCTVDTISLKTMAQDAINRSAIDTISLNQQQTSSIDLR
QQQSQKSLLQHFNSETNTNQQQLTSQQQQQIQNSSLATTAGSNNGPSTGSGLINVSNATG
QPISGNAKTHTCQPQQMATTEAHIPTLLGVTPLGPTPLQKEHQMQFQMMEAAYYHLPQPM
DTEKLQTYFHRAPVLTPAHYPQAQMPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLED
KELN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaaattgcaaggcgaaattgatcgatgtttaaaaaaggtagcagag
ggcgttgaaacgtttgaggatatctggaaaaaagtacacaatgcgacaaacaccaaccag
aagcaaaaacatctgcaagagaagtatgaggcagacctcaaaaaggaaatcaagaaattg
caacgattacgcgaccaaattaaatcatggattgcatcagctgaaattaaggataagagc
tcccttcttgagaatcgacggctcattgaaacacaaatggaacgctttaaggtggtcgag
cgcgaaacgaaaacaaaagcctactcaaaggaaggcttgggagctgcacaaaagatggat
cctgcccagcgtatcaaagatgatgcacgcaattggttaaccagctcaataagttcactt
caaatacaaattgaccagtatgagagcgagatcgaatcgttgctggcaggtaaaaagaaa
cgtttagatcgagacaaacaagagcgaatggatgacctacgaggaaagttggatcgccat
aagtttcacataacaaagttggaaactctgctcaggctgcttgacaatgacggcgtcgaa
gcagagcaggtgaacaagatcaaagacgatgtcgagtactacattgattcatcacaagag
ccagactttgaggaaaatgagttcatatacgacgatataatcggtcttgatgaagtggag
cttagtggcacggctaccacggacagcaataacagcaacgagacaagcgggtctccaagc
agcgtcacttccggaggcagtccatcccagtcccctgtcactgttcaacaaattttaaac
acttcgtcgcagggagctgctagtagtggtagcagtgcagctagcgcagcactatttcag
cagcagctgacagcggcacaatcgaatggcaacaatgtaggctacgcgagcgacacaagc
gcagcttcttcgtcggccacaacatctacggatcctgcaggcggtacaattgctataaat
tatgttggggggctaggcgataaacgcaacaagagcagcgaaagcaataccctcaaattg
aaactacaacctcatcaacttgtaaaacctacccctgtacgagccacggccaaactgcct
cagagcagtgatacccaagtcaataagattgtcagttcaactcccagcaaaaatcaacaa
cagctgcctacagcagcttcaatcgttgcagcctccgcaatgcagtcgcaaaacagtagc
agtgggagcggaagttgcaactctactgtaggaacgggagcatcgcaatcaacgtctagt
ggtaacaatcctgcggttcagccaaacgctccaacgcctggccaaagctccacagtcatt
gccgctgcagcagcttcatctaatgtcgtttcggcgccgatcgtgagcagcgccaatgtt
caaggcccatctgtgatccaatcaacaccaacaattgcattcgctgcagtagcaaaacac
aatacatcacttctggaaaatggtcctgttttgcagcagcaactagcagtaactcctacc
gtggcagctatcgtaggagctggaacacaggcacagcagaaacatgtgcaaccattatcc
aatcttcaaacaaattcccctcacatacaaaatggtcttcctgtctcggacagtaataat
gacacaagctgcactgtcgatacgatttctctaaaaacaatggcacaggatgctattaat
cgatccgcgatcgatactatttcacttaatcagcagcaaacaagcagcattgacctgaga
cagcagcagtcgcagaaatcacttcttcaacatttcaactctgaaaccaatacgaatcaa
cagcaattgacatcccagcagcagcaacagattcagaatagctcccttgctacgaccgca
ggatctaacaacgggccttctactggcagtggtcttataaatgtatctaacgctactggt
cagcccatcagcggaaatgccaaaacgcatacgtgccagccccagcagatggccacgacg
gaagcgcacattcccacactgcttggtgtgacaccgcttgggccaacaccacttcagaag
gagcaccaaatgcagtttcaaatgatggaggctgcttactatcacctgccacagcctatg
gacacggaaaagctacaaacgtactttcatcgcgcaccagtgctcacgccagcgcactac
ccccaggcacagatgccaatttatgatacagttgagttttatcaacgactctcaacggag
acccttttttttgtgttctactatatggagggctccaaggcccaatatctagcggctaag
gccttaaaaaagcagagctggcgtttccacacaaagtatatgatgtggtttcaaaggcac
gaggagcccaagattatcaacgatgattacgaacagggtacgtacatctatttcgattat
gaaaagtggagtcagcgaaagaaggagggattcacctttgaatacaagtacttagaggac
aaggagctgaattga
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