Drosophila erecta: 6542713
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Entry
6542713 CDS
T01060
Name
(RefSeq) putative ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6542713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6542713
03036 Chromosome and associated proteins [BR:
der03036
]
6542713
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6542713
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
6542713
mRNA degradation factors
5'-3' decay
Decapping complex
6542713
Chromosome and associated proteins [BR:
der03036
]
Eukaryotic type
Gene silencing
piRNA pathway
6542713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA
Motif
Other DBs
NCBI-GeneID:
6542713
NCBI-ProteinID:
XP_001969421
UniProt:
B3N945
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MMTEKLNSGHTNLTSKGLINDLQIAGNTSDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEF
EEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQI
DPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLI
IATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSAT
FPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTEIKP
IPKVIDPALYVANVGASVGDTCNNSDLNNSANEEGNVSK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgaaaagttaaattctgggcacactaatttaacaagcaaggggcttataaat
gatcttcaaattgctggaaacacaagtgacgatatgggctggaaatcaaagctgaagctg
ccgccaaaggacaaccgattcaaaacaactgatgtgaccgatacgcgaggcaatgaattc
gaggagttttgccttaaaagagaactgcttatgggtatattcgagaagggatgggagcgc
ccttcgccaattcaggaagcagctattcctatagctttaagtggaaaagatgtactggct
cgggccaagaacggcacaggcaagacaggagcctactgcatcccagttttagaacaaata
gatccaaccaaggactacattcaggcacttgtgatggtccccacccgagagttggcgcta
caaacctcacagatatgtattgagctggcgaaacatcttgatatccgggtaatggtcaca
acgggaggaaccattctgaaggatgacattcttcgtatttatcaaaaagtacaattaatt
attgcaactcccggacgaatattagatctgatggacaagaaagttgccgatatgtcgcat
tgcaggatattagttttggatgaggccgataaactattgtcgcttgattttcaaggcatg
ctggatcatgttatacttaagttaccaaaggatccacagatcttgctattttccgcaaca
tttccactaacagtcaagaatttcatggagaagcatttacgcgagccttacgagatcaac
ctgatggaggagctaacattaaagggtgtcactcagtactatgcattcgtacaagagcgc
cagaaagtacactgcttgaatacgctgttttctaagctacaaatcaatcagtctatcatc
ttctgcaattccacgcaacgtgtcgagttattggctaaaaaaatcacagagcttggatat
tgctgttactatattcacgcaaagatggcccaagcacacagaaaccgagtgttccacgat
ttccgtcaaggactttgtcggaatctggtatgctccgacctgttcacccggggtatcgac
gtgcaggccgtgaatgtagtaatcaatttcgatttccctcgaatggcagagacatacttg
catcgaattggtcgctcaggacgtttcggtcatttgggtattgctattaacctgataacc
tacgaggatcggtttgacctgcatcggattgaaaaagaacttggaactgaaataaagcct
attccgaaggtcatagaccccgccctttatgtcgcaaacgttggcgcatccgttggagat
acttgcaacaacagtgatctgaataattctgcgaacgaggagggcaacgttagcaaataa
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