Drosophila erecta: 6543222
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Entry
6543222 CDS
T01060
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6543222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6543222
03009 Ribosome biogenesis [BR:
der03009
]
6543222
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6543222
Spliceosome [BR:
der03041
]
Complex A
U2 snRNP components
U2 related factors
6543222
Complex B
6543222
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
6543222
Ribosome biogenesis [BR:
der03009
]
Eukaryotic type
90S particles
Helicases
6543222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
Flavi_DEAD
SRP54
AAA_30
ABC_tran
ResIII
AAA_25
T2SSE
AAA_7
ATPase
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
6543222
NCBI-ProteinID:
XP_001970642
FlyBase:
FBgn0115426
UniProt:
B3NA05
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSKRRIEVGETYSSSKMKNDAEASSSSAAAAAGTVAQILGGFVPNKQPPTINPLTKAPYS
QRYQNLYKKRIALPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRK
GVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAM
SDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDN
APLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEAC
KRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVSTNIAET
SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT
EKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEA
KKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLAR
IMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTC
LDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLFSLAPQYYDLNNFPQCEAKRQLELLQQR
METKQYQKGF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgtcgaatcgaagtgggggagacctacagcagcagcaagatgaagaacgat
gcggaggcgtcctcctcgtcggcggcagccgctgccggcacagtggcccagatcctgggc
ggatttgtgcccaacaagcagccgcccacgattaacccactgaccaaagcgccgtattcg
caacggtaccagaatctctacaagaagcgcatcgcgctgcccgtgtttgagtaccaggcg
gacttcatgcggctgctcagccagcaccaatgcattgtgctggtgggcgagacgggctcc
ggcaagacgacccagatcccgcagtggtgcgtggacttcgcagtgtccaaggggcgcaag
ggtgtctcctgcacccagccacgtcgagttgccgccatgtccgtggcccagcgcgtttcg
gaggagatggatgttaaacttggcgaagaggtcggatactccatccgtttcgaggactgc
tccacggccaagacgctgctcaagtacatgaccgacggcatgttgttgcgcgaggccatg
tccgatcctatgctggagcagtaccaggtcatcctgctcgacgaggctcacgagcggacc
ctggccacggacatcctcatgggcgtgctcaaggaggtcatccgtcagcgcaacgacctt
aagctggtggtcatgtccgccacactggacgccggcaaattccagcagtatttcgacaac
gcaccgctcatgaatgtgcccggtcgcacacatcccgtggagatcttttacacgcccgaa
ccagaacgggattacctagaggctgccattcgcacggtcattcagatacacatgtgtgag
gaaatcgagggtgatatccttatgttcctcacgggccaagaagagattgaggaggcttgc
aagcgcatcaagcgcgagatcgacaatttgggctctgaaattggagagttgaaatgcatt
cccttgtactccacgttgccgcccaatttgcagcagcgcatctttgaggcggccccacct
ccaaatgccaatggcgcgatcggacgcaaggtggtggtgtccaccaacatcgccgaaacc
tcgctgaccattgacggagtggtgtttgtgatcgatccaggcttcgccaagcaaaaagtg
tacaatcctcgcattcgagtggagagtcttctcgtctcccctatttcgaaagcgtctgcg
cagcagagagccggtcgtgctggacgtacgcgtcctggaaagtgtttccgtctgtacacg
gaaaaggcgtttaagaacgagatgcaggacaacacctaccccgaaatcctgcgctctaat
ttgggcactgtggttctgcagctcaagaagttgggaatcgacgacctagtgcatttcgat
ttcatggacccccctgctcctgagaccttgatgcgtgccctggagctgctcaactatctg
gccgccttggatgatgacggcaatcttacggacctgggcgccgttatgtccgagtttccc
ttggatccgcagctggcaaagatgctgatcgccagctgccaacacaactgttccaatgaa
atactttccataacggccatgttgtcggttccacaatgcttcgttcgtcccaacgaggca
aagaaagctgccgacgaagccaagatgcgattcgcccatattgacggagaccacctgacc
ttgctgaatgtctatcacgcctttaagcagagcagtgaggatccaaattggtgctacgag
aacttcataaacttccgctcgctaaagagtgcggataacgtgcgccagcagctggctagg
atcatggaccgctttaacttgcggcgcacgagcaccgaattcacctcgaaggactactac
gtaaacatacgcaaggccctcgtgcaaggcttcttcatgcaggtggcccacctggagcgc
actggttactatctgaccatcaaggacaaccagaacgtgcagctgcatccgtcgacgtgt
ctcgaccacaagccggattgggtcatctacaatgagtttgtgctgaccacaaagaactac
attcgcacggtgactgatgtgaagcctgagtggttgttcagcctggcgcctcaatattat
gacttgaacaacttccctcagtgcgaggcgaaacgacagctggagttgctacagcagcgg
atggagaccaagcaataccagaagggtttctaa
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integrated database retrieval system
