Drosophila erecta: 6543552
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Entry
6543552 CDS
T01060
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6543552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6543552
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6543552
Spliceosome [BR:
der03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
6543552
Complex B
6543552
Complex C
U2 SnRNP specific factors
6543552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
6543552
NCBI-ProteinID:
XP_001972305
UniProt:
B3NCN4
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSGYRGIGGGGFPYRKPASSGNNMNAVPPPPMLNSRGYTGSRGGLAGASRGGVTGSTTSK
HGYSTLDSISQYTNVSNLVGKRKHHTDDDYFDDDDEPKEKEIEQAYIPAPGSPGAPPSSA
QKQEESDSDDDPLEQFMAGINQQVEKEKRQQAPKPPTQAVRGDIDDEDDEESYYRYMKEN
PNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPTIYHSEIEYEPFEKNFYTQHDDIAA
LDEEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPT
ALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQRQLKPGDGPIGLILAPTRELSLQIYNEA
KKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTYLVL
DEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNE
ANQDITQSVYVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCL
LLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIKNVVNYDTARDIETHTHRI
GRTGRAGEKGNAFTLVTDKDKEFAGHLVRNLEGADQQVPDDLMELAMKSSWFRSSRFKQG
KSKRPANTHTGLGYRERGHGGGFGSAGGSESSSSGSAQSPSEGPSSKSSSSAGPATDRYA
AMREAFRSQYNNQFRASSDRTWEKTLPDSGVFAAPMAPPSSSQGTSSASSNSSSQDAKKA
KKSRWN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctaccgaggcatcggcggcgggggattcccttaccgcaagccagcgagttcc
ggcaacaacatgaacgctgtaccgcctcccccgatgctgaattcccgtggctacacgggt
tcccgcggaggattagcaggagcaagccgtggcggagttactgggagcacaacgtcgaaa
cacggctactccactctggactccatcagtcagtacaccaatgtctccaatctggttggc
aaacggaaacaccacacggatgatgactatttcgatgatgacgatgagcccaaggaaaag
gagattgagcaagcctatataccggcaccaggatctccgggagccccgccttcttcggcc
caaaagcaagaggaatccgattcggatgacgatcccctcgagcagttcatggcgggaatc
aaccagcaggtggagaaggagaagcggcaacaggcacccaagcctcccactcaggcggta
agaggtgacatcgatgacgaggacgacgaggagagctactatcgctacatgaaggagaat
cccaatgctgggctacgcgacgagggatccgatcaggaaatcgagtacgatgaggatggc
aatcctatagcgccaccgaagaaaaaggatattgaccctctgccgaccatctaccattcc
gaaatcgagtacgaacccttcgagaagaacttctacacacagcatgacgacatagccgcc
ctagatgaggagcaagtccgggaattaaggcgcacactgggcgtaaaagtcactggtcca
tcaccaccaaaaccagtcacgtccttcggccatttcggcttcgatgaacagctcatcaag
gctgtgaggaaagcggagtacacacagcccacccccatccaggcacaagctgtgcccacc
gccctgtccggcagagatattattggaatagccaaaactggttctggtaaaacagcggct
ttcatctggcccatgctaatgcatgtgatggatcagagacagctgaaaccaggcgacgga
cccataggacttatcctagcacccactcgcgagctttccctgcagatctacaacgaggcc
aagaagtttggcaaagtgtacaacctgaacgtggtctgctgctacggtggaggttccaaa
tgggagcaaagtaaagctctggaacagggagcggagattattgtggctacgccaggacga
atgatagatatggtcaagatgaaggctaccaatctgaggagggtgacttacctggtgctt
gacgaggccgaccgtatgttccacatgggctttgagccccaggttcgctccatctgcaac
cacgtgcgcccagatcgccaatgtctgatgttctcggccacctttaagaagcgaatcgaa
cgactcgccagggatgtgctttccgatcccgtgagaatagtgcagggagatctgaacgag
gcgaaccaggacatcacgcagtctgtgtacgtcttccccaatcccctgcagaaatggaat
tggctgctgtgccacctggttaagttcctctctgaaggaagcgtcctgatcttcgtgact
aagaaagtagatgccgaaacggtgtccaacaatctgttaattaaggagtacaattgtctt
ttacttcacggcgatatggatcaagcggacagaaacaaggtcatcactcagtttaagagg
aaagagtgtgatatactagtggcgaccgacgtggcagccagaggattggatataccccat
atcaagaatgtggtaaactacgacactgccagggatattgaaactcacacgcacagaatt
ggaagaacgggcagagccggcgaaaagggtaatgcattcactctagttaccgataaagac
aaggagttcgccggacatctggtgcggaacttggagggcgccgatcagcaggtgcccgac
gatctaatggagctggccatgaagagttcctggttccgcagctcacgtttcaaacagggc
aaaagcaagaggccggcaaatacccacacaggattgggttatcgggagagaggacatggc
ggtggttttggttctgctggtggctcggagtccagttccagcgggtctgcccaaagtcca
tccgaaggaccctccagcaaatcctcttccagcgcaggaccagccacagatcgctatgca
gcgatgagggaggcattccgatcccagtataacaatcagttccgcgcgtccagcgatcgg
acttgggaaaaaactctgccggactcgggagttttcgctgcgccaatggcaccgccatct
tcatcccaaggtacttcctccgcatcgtccaatagcagcagccaggacgccaaaaaggcc
aagaagagtcgctggaattga
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integrated database retrieval system
