Drosophila erecta: 6544520
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Entry
6544520 CDS
T01060
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
der
Drosophila erecta
Pathway
der03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
6544520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
der03400
]
6544520
DNA repair and recombination proteins [BR:
der03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
6544520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF8835
Motif
Other DBs
NCBI-GeneID:
6544520
NCBI-ProteinID:
XP_001973060
UniProt:
B3NI00
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MSKKLNTSVGGTPKNTLLNYFSKSPAVDKKKFIPSEKSDPKASTPDKENLQNQQPKVKEA
QKNDSKPAAKRKLPISDDEAGNGQRKRKRIVQPESESEPEMEETKSEDDFSDCASDYEPD
EKESSDDSVSSGEEEVSPSENDMSVDSPTPKKTRKKTKILNNNNNNEPTSKKVKLESSIQ
LAEGSTFQEKLKNLQSNAKKDASYDDIVTSTSNLDEPVVWPHQKLEFLQPDKIKDKQGRR
PDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHMDADVGVN
ELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTETPDMMTERCKRIKATKFD
KVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGTWSRYGVCFIDTSIGDFH
VGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQIVRTVLGGILKEQVPGNGTQAC
SAEKTLKLLAERYYAGSGSDDNWPLVLRTMQSDMDHLGLTPNDNYKLALKALGQCIFFIH
KCKLEPKVLPMARYQLYVPPDQLADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHSLLS
TLDHCCTKFGKRLLHHWLCAPSCDVAVIKERQDAIGELIRMASELQEVRALLAPLPDFER
NLAQIHLFGNKQIKQMDHPDSRAILFEEKIYNKQKLLGFMAVLKGFNALTKLPTLFHQCE
TALLRRITQLPESGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG
EIEKRLKSYLEQQERHFGCRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPSR
RYTTAETRALLKDMQHAEETRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLA
EYAGQQMVICVPELVSGAEQPFIQLEEGYHPCVNASTYIPNGLELGTTSEAPLSLLTGPN
MGGKSTLMREVGLLVIMAQIGAHIPATSCRLSLVDRIFTRLGAQDDILAGHSTFLVELNE
TSLILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFH
NDKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRA
YELSKKVEAIALQRKITTKIVAATGASEDSKKEKLIALKDLLKQLKMCQV
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaagttgaacaccagcgtgggcggaacgcccaaaaacacactacttaattac
ttttccaaatcgccggctgttgacaaaaagaaatttattccaagcgagaaatcggaccct
aaagcatccacgcccgacaaggagaacctccagaaccagcagccaaaggtgaaggaggcc
cagaaaaatgactccaagccggcggccaagaggaagttgcccatttccgatgatgaggcg
ggcaatggtcaacgcaagcggaagcgcatcgtacagccggaatcggaaagtgaaccggaa
atggaggagaccaagtcggaagacgacttctccgattgcgcctccgactacgaaccggat
gagaaagaatccagcgatgatagcgtcagcagcggcgaggaggaggtgtcgcccagcgag
aacgacatgtccgtggacagtccgactccaaaaaaaacgcgcaaaaagacaaagatcctg
aacaacaacaataacaatgagccaacgagcaagaaggtcaagctggagtcgtccatccag
ctggccgagggttcaacctttcaagagaagctgaagaacctgcagagcaatgccaaaaag
gatgcttcgtacgatgacatcgtgaccagcacgtccaatctggatgagcccgttgtttgg
ccgcaccagaaactggagttcctccagccggacaagatcaaggacaagcagggaaggcgt
ccagatcatccggactacgacaagagcaccctgcatgtaccggagaagttcctcaacgga
ctgtcgccgggagttcgacaatggtgggtccttaagtcggacaactacgactgtgtcttg
tttttcaaagtgggcaagttctatgaactgtatcacatggatgcggatgtgggcgtcaac
gagttgggcttcacttacatgcgcggcgagtttgctcactcgggtttcccggagatatcc
ttcgacaagatgtccaccatcctcatagacaggggcttcaaggtggctcgcgtggagcaa
actgaaacccctgatatgatgactgagcggtgcaagcggatcaaggccaccaagttcgac
aaagtggtggcccgcgagatctgccagattaccaatcgtggcacccaggtctttggctca
cagtgcaagatcggaccgaatcatcagcccaactatatgttggccatagtggagcaggat
gagggaacttggagtcggtatggagtgtgctttatagacacctccattggggactttcat
gtgggtgagtttgaagacgacaagaactgttcccgcctgctcaccctgttgtcacatcac
atgcccgtgctgctgctcaatgaaaaatccgctctgagccagcgatcccagcaaattgtg
cgcactgtgctgggtggaatcctcaaggagcaggttcccggcaacggaacgcaggcctgc
agtgccgagaaaaccctgaaacttctggcggaacgttactatgctggaagcggatccgac
gacaactggccgttggttctgcgcacaatgcagtcagatatggatcatttgggccttaca
cccaatgataattacaagctagcccttaaagctctcggccagtgcatcttttttatacac
aagtgcaagctggagcccaaggtgctgcccatggcgcgttatcagctatacgtgccgccc
gatcaactggcggatgccaagccggcggtggcatctactttgaggcgctcccacatggta
ctggatgccactactttgtcgaacctcaggattattggagaggaacactccttgctctcc
actttggatcactgctgcaccaagttcggaaagcgactgctgcaccactggctttgcgct
ccgagctgcgatgtggcggtcatcaaggagcgacaagatgctattggtgagctgattcga
atggccagtgaactgcaggaagttcgcgctttgctggctccattgccggatttcgaacga
aatcttgcacagattcacctatttggaaacaaacagataaagcagatggatcatccggat
tcccgggcgattctcttcgaggagaagatatataacaagcaaaagctactgggattcatg
gccgttcttaagggattcaacgccctaaccaagctgcctacgctgttccatcagtgcgaa
acagctttgctcaggaggattacccagctgccggaatctggaggatcattccccgatctt
agcaaggaactacaatattttgccactgcctttgatcatgatgcagctgctaaaacaggt
gtgattgcgcctcaagcgggaatggatgctgagtacgatgcagcaatggattccataggt
gagattgagaaacgcctgaaatcatatcttgaacagcaggagcgacactttggctgccgc
attacctatttcggaagcgacaagaaacgttaccagttggatgtgccggaaagccatgcc
agtaaggccaataaatcctattccttggaaggacaaactaagggaaagaaaccatcgcgt
cgctacaccactgctgaaacaagagctctactgaaggacatgcagcacgctgaagagaca
aggaacatggtgctaaaagatctagcgcgtcgtctttttgagaagttctcaaatcattac
gaccagtggaagcaatgcatcgactgcgtcgccaacctggatgtcctgggctcactagct
gaatacgctggccagcaaatggtcatttgtgtgccagagctggtttctggtgcagagcag
ccgtttatccaactggaggagggctaccacccttgcgtaaatgcatccacctatatacct
aatggcctggaattaggcactacctcggaggctccactatccctgctcactggtcccaat
atgggcggcaagagtacgctgatgagggaagtgggactccttgtaattatggcgcaaatt
ggcgcccacattcccgctactagttgtcgcctttcgttggtggacagaattttcacgcgc
ctaggtgctcaagatgacattcttgccgggcacagtaccttcctcgtggagcttaacgag
acgtcactcattctaaagcatgccacatgccattcgcttgtgttgctcgacgaactgggc
aggggaacagccacttatgatggcacagcgattgctgcctctgttgtgaacttcctggcc
aatctcaagtgtcgcactctgttctccacgcactaccacaatctgattgatttcttccac
aacgacaagagaattacactgggtcacatggcctgcatggtggagaacgaagacaatgcg
gaccccacccaagaaacggtcacgttcctgtacaagtacacagccggtgcttgtcccaaa
tcgtatggctttaacgctgccaaattagctggaatgcctcagggaattataaagagggcc
tatgagctttccaagaaagtcgaagccattgctctgcagcgcaagattacgaccaagatc
gtagctgccacaggcgcaagtgaagactccaaaaaggagaaattaattgctctcaaggat
ttattaaagcagctaaaaatgtgccaagtttaa
DBGET
integrated database retrieval system
