Drosophila erecta: 6546545
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Entry
6546545 CDS
T01060
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
der
Drosophila erecta
Pathway
der03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6546545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6546545
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6546545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF3135
Motif
Other DBs
NCBI-GeneID:
6546545
NCBI-ProteinID:
XP_001975910
UniProt:
B3NS08
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSFFGANTSLGATSTPTKTTGGLFGSPFGSTAVASQPAPAFGTQATSTPAFGAQPATSAF
GAGSAFGATAAAPAFGAATATSAFGGTAFGSAPAFGAATTTTAGTGLGGGGFGGFGAAPA
TSQASLFGAPATSAAPPAFSGFGQQAAASTAPASGFSGFGTTTTSAPAFGGFGTNQSTGF
GGGAFGSTFGKPANTTVTPGFGGFGGTSFMLGQPQQQPAPISADEAFAQSILNVSIFGDD
RDKIVAKWNYLQATWGTGKMFYSQSAAPVDITPENVMCRFKAIGYSRMPGKDNKLGLVAL
NFCRELSAVKPHQQQVVQTLHSLFGSKPNMLVHIDSIKELENKKCQMVIYVEEKLQHAPN
ESKRILATELSNYLNQASLKPQLNNLGVVEALALVLPDEDQLKEYLENPPRGVDPRMWRQ
ANSDNPDPSKFIPVPLVGFNDLKWRVKCQEQETDTHALYIKKVEGELTELRQRHATATAK
ILEHKRKLAELGHRILRIIVKQECTRKVGTSLTPEEEAMRTKLQNMQAVVSAPTQFKGRL
SELLSQMRMQRNQFAANGGAEYALDKEAEDEMKTFLTMQQRAMEVLSDTVNKDLKALDVI
IKGLPELRQS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcttcggagccaacacgtcgctgggtgcaacaagcacgccgaccaaaacaact
ggcggcctcttcggatcgccgtttggcagcaccgctgtagccagccagccagcacccgct
ttcggaacacaggccacatcaactccggcttttggcgcccaaccggcgacatctgccttc
ggagcaggttccgccttcggagcaaccgcagcagccccggcttttggtgctgccacagca
acttctgccttcggcggcaccgcctttggcagcgctccggcatttggagcggcgacaacc
acaacagcgggcaccggtcttggaggaggcgggtttggcggatttggagcagctccggca
acgagtcaggccagtctgttcggcgctccagcgactagtgcagcaccacctgcatttagc
ggattcggccaacaggcagctgcgagtacagcgcctgcaagtggattttcaggctttgga
acaaccacgacttcggcacctgcttttggcggcttcggcaccaaccagtccactggcttt
gggggcggagccttcggatccacctttgggaaaccagcgaatacaacagttacgccgggg
tttggtggattcggcggcaccagctttatgcttggacaaccccaacagcagccagcgccc
atttcggccgacgaggcgtttgcccaatccattctaaatgtgtccatttttggcgatgac
cgggacaaaatagtggctaaatggaactacttgcaggctacgtggggcacgggaaagatg
ttttactcccagagtgcggcgccggtagacattacgccggaaaacgtgatgtgccggttc
aaagccataggttatagtcggatgccgggaaaggacaacaagttgggactggtggctctg
aacttctgcagagaactctcagctgttaagccacaccagcaacaagtggttcaaacgctt
cacagtttatttggcagcaagcctaacatgctggttcacatcgattccattaaggagcta
gagaacaaaaagtgccaaatggttatctacgtggaggaaaagcttcagcatgctcctaac
gaaagcaagcgtatattggccacggaactctcaaactacctaaatcaggcatcgctgaaa
cctcagctaaataatctaggggttgtggaggctttggctctggtattacccgacgaggac
caattaaaggagtaccttgaaaatccaccccgaggcgtggatccgcgcatgtggcgtcag
gccaattctgacaatccagatcctagtaaatttataccagtgccgttggtgggcttcaac
gacttgaagtggcgcgttaagtgccaggagcaagaaacggacacgcatgcattgtacata
aaaaaagtggagggtgagctgacagaactcagacagcgccacgccacggctacagcgaag
atacttgaacataaacggaaacttgccgagcttggtcatcgcatattaaggataattgtg
aagcaagagtgcacccgtaaggtaggcacatccttgacgcccgaggaggaggccatgcga
accaagctgcagaacatgcaggctgtcgtgtccgcccccactcaattcaagggacgactc
agcgagctgctctcccagatgcgcatgcagcgcaatcaattcgccgccaacggaggggcc
gagtatgccctcgacaaggaagcggaggacgagatgaagaccttcctgaccatgcagcaa
cgcgccatggaggtgctgagcgataccgtcaacaaggacctgaaggcactggatgttata
attaagggactgcccgaactgcgacaatcgtga
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