Drosophila erecta: 6549373
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Entry
6549373 CDS
T01060
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6549373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6549373
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6549373
Spliceosome [BR:
der03041
]
Complex C
Other components
Step II factors
6549373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
Flavi_DEAD
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
6549373
NCBI-ProteinID:
XP_001975683
UniProt:
B3NRD1
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MDELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDAFRKALLENGAEFP
DSLVENLQRIINLMRPSKPGGDSQEKIGGDKKEDKKSQLLKMFPGLALPNDTFSKKEESD
GEEKVKPDKHAETHKKTDMSDVDAAMMELEALAPGEGNTVVRPPKEVGSKDRHKRRSRDR
DTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRERRHRRSSSRD
RHERRRRSRSRSTDRRDRRDRSKDRSEKMPPPSAAMSDDPEAGKIYSGKVANIVPFGCFV
QLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMTITGQKVSLSMKEVDQDS
GKDLNPLSHAPEDEESLRDRNPDGPFSSSTSMLNLQGNGLDGDEHESRKRVTRISSPERW
EIKQMISSGVLDRCEMPDFDEETGLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSP
VRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEMEAVPTSLNKNWIDPLPEEESRSL
AANMRGMGAAPAEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDN
QILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQE
VGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLL
KTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASL
ITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ
TRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ
AAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLL
HFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQC
SDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAW
CYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQ
EGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFF
RFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctgcagaagttggagtacctttcgctggtctcgaagatctgcacggagcta
gacaatcacttgggcatcaacgacaaggacctggccgagtttatcatcgatttggaaaac
aaaaatcggacatacgatgcatttcgcaaggctctgcttgagaatggcgccgaatttccg
gactccctggtcgagaacctgcagcgcatcattaatcttatgcgccccagtaaacctggc
ggcgatagccaggagaaaattggcggcgacaagaaggaagacaagaaatcgcaactgttg
aaaatgttccccggcctggctttgcccaatgacacctttagcaagaaggaggagagcgat
ggcgaagagaaggtgaaaccggataagcatgccgaaacgcacaaaaaaaccgatatgagc
gatgtggatgcagctatgatggaactggaagcgcttgcccccggtgagggcaacacagtg
gtaagaccacctaaggaagtcggttccaaggaccgccacaagcgcagaagtagggatcga
gacacaaagcgacgcagtagatcgcgggaggatagacactctgatcgccgcagaagcagg
tcgcgtgacaaagaacgacgtcgacgaagcagatcccgagataatcggcgcagaagcagg
tcccgcgaggatcgcgatcgagacagagagcgacgccacaggagatcaagctcaagagat
cgccatgaacgccgaagacgaagtcgatctcgttccacagatcgtagagataggagagat
cgatcgaaggatcgcagtgaaaagatgccgccaccgtcggccgccatgagcgatgatccg
gaggcgggaaagatctactccggcaaggtagctaatatcgtaccctttggctgcttcgta
cagctttttggactgcggaaacggtgggaaggcttagtacacatctcacaactaagagca
gaaggacgcgtaacagatgttacggaggtagtcactcggaatcagactgttaaagtgaaa
gtgatgacaataactggccaaaaagtttccttgtcaatgaaagaggtggaccaagactcc
gggaaggatctcaatccactgtcacacgctccagaggacgaggagtctctaagagatcga
aatccagatggtccctttagcagcagcacatcgatgctgaatctgcaaggtaatggtttg
gatggtgatgagcacgagtccaggaaacgtgtgaccaggatctccagtcccgagcgctgg
gaaatcaagcagatgattagttccggtgtgttggacagatgtgagatgcctgatttcgac
gaggaaactggcctattgccgaaagatgaagacgacgaagccgatatcgaaattgagatt
gtggaagaggagccccccttcctctccgggcacggtagagccttacatgatctgtctcca
gtgagaattgtaaaaaatcccgatggctccctagctcaagctgccatgatgcaatcggcg
ttgtctaaggagcgtcgcgaacagaagatgctgcagcgcgaacaagagatggaagctgtg
cctacgagcctcaataagaattggattgatccactgcctgaggaagagagccgcagccta
gcggccaacatgcgaggaatgggtgctgctcccgctgaagttccagaatggaaaaagcat
gtaattggcggcaaaaagtcctcattcggtaagaagactgatctgacgctagtggagcag
cgtcagtcgttgcccatatacaaactgcgagatgatctgatcaaggcggtcacggacaat
cagatccttattgtgattggagaaacaggttcaggaaaaaccacacagatcacccagtat
ttgggcgaatgtggattcactgctagaggaaaaattggctgcacccaacccagaagagtg
gctgccatgtcggtggccaagcgtgtggcggaggagtacggttgcaggttaggccaggaa
gtaggttacaccatccgtttcgaggattgcaccagtccggaaaccataattaagtacatg
actgatggtatgttgctccgtgagtgcctaatggaggcggagttaaaaagttattcggtc
attatgttggatgaagctcacgaacggacgatccatacggatgtgctcttcggcctgctc
aagacagccgtgcaaaagcgaccagaactgaagctaattgtcacatcagccaccttggac
gcggtgaaattctcgcagtacttcttcaaggcgccaatcttcacaattcccggaagaacc
tttcccgtggaggttttatatactaaggaaccagagacggattatttggatgcctctctg
attacagtgatgcaaatccatttgcgagaacctcctggtgacattctgctcttccttacg
ggtcaggaagaaatcgacacggcttgcgaaatcctgtacgaacgaatgaagagtttggga
ccggatgtccctgagctgattattctgccggtgtattcagcattgccatccgaaatgcaa
acgcgtatatttgatcctgcgcccgctggtagccgaaaggttgttatagccaccaatatt
gctgaaacttcacttacaatcgatggcattttctatgtggtagatcctggttttgtgaaa
cagaaggtgtacaactcgaaaacgggcatggactccctggtggttactcccatttcacaa
gcggcagcaaagcaaagagcgggaagagccgggcgtactggcccaggaaaaacctaccgt
ctttatacggaacgtgcgtatcgagatgaaatgctgcccactccggtgccggaaatccag
cgcaccaatctggccacaacagtattgcagctgaagacaatgggtataaacgatctgctg
cactttgattttatggacgctccgcctgtggaatcgctggtaatggcgctcgagcaacta
cattccctctcagcgttggatgatgaaggcctgcttactcggctgggcagacgcatggcc
gagtttcccctcgagccgaatctctccaagatgcttataatgtccgtcgctctgcagtgc
tccgatgagattttgactatagtatcgatgctcagtgtgcagaacgtgttttacaggcca
aaggacaagcaggcactggcggatcagaaaaaggccaaattcaatcaggcggaaggtgac
catctgacgctgctggccgtttacaacagttggaagaacaacaaattctcaaatgcctgg
tgctacgaaaacttcgtacagatccgaaccctgaaacgcagccaggatgtgagaaagcag
ctgctgggaatcatggacaggcataaattggatgtggtatccgctggaaaaaactctgtg
cgaattcagaaggcgatctgctccggtttcttccgcaatgcagcgaaaaaggatccgcag
gaggggtatcgtaccctcgtcgattctcaggtggtttacatccatccgtcgagtgcgctt
tttaatcgccagccagagtgggtcatctatcacgagctggtgcagaccaccaaggagtat
atgcgtgaggttaccacaatcgatcccaaatggctggtagagtttgctccgtcattcttc
cgcttctcggaccccacgaagctaagcaaattcaagaagaatcagcgcctggagccgctg
tacaacaagtacgaggagcccaatgcctggcgtatctctcgcgtccgtcgacgtcgcaat
taa
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integrated database retrieval system
