Drosophila erecta: 6549497
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Entry
6549497 CDS
T01060
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6549497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6549497
Enzymes [BR:
der01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6549497
Spliceosome [BR:
der03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
6549497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
Flavi_DEAD
AAA_19
nSTAND3
AAA_30
SRP54
Cas3-like_C_2
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
6549497
NCBI-ProteinID:
XP_001974288
UniProt:
B3NM88
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MSGKNRKRTASSSSSAEEPDSEEESRLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRA
IEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFDESVLTK
REKEERQYKKQLLNIAKEHEKARELERVQRYNMPQDLKKGERSEYVEVDDFEKQPNSEQK
KWEAEQLASARFHFGAKDAKAAEEYELLLDDQIDFIQALTLDGSRDKSSSRQPELSEKER
KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVDAGFTKDKKM
IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS
EPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDA
PIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEV
LQDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNII
YVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHEL
EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGE
LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTA
RKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEI
DMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLY
HELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKVAGRAEMAQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaaaaacagaaaacgcacggccagcagcagcagcagcgccgaggagccggac
agtgaggaagaatctcgcctaaaggacctgcaggagcgcgacgagttcgccagccggctc
aagaagcgggatgacgatcggacgcgcaatgtggttgattccaccggcggacgcagggcc
atcgaagaggccaccaagcggctgaagctggagcacgaggatcgggataagatagtacct
cacctgcgtcttcagtcgcgtcgccagtacctggagaagcgcaaggatgacaaggtggcc
gagctggaggcggacatcctggacgatgaatacctctttgatgagagcgtcctgaccaaa
cgggagaaggaggagcgccaatacaagaagcaactgctgaacatcgccaaggagcacgaa
aaggcgcgggaactagagcgcgtacagcgctataatatgccacaggacctgaaaaaggga
gagcgatctgagtacgtagaggtggatgactttgagaagcaacctaactcggagcagaag
aaatgggaggctgaacaattggcctcggcgcgtttccatttcggtgccaaagatgccaag
gcggcggaagagtatgagctgctccttgacgatcagatcgatttcatccaagcgctaacc
ctggacggaagtcgggacaaatcatccagccgacagccagaactctcggagaaggaacgg
aaacgcttgacgttggacgagaccagaagatccctgcctgtttatcctttcaaggaggat
ctcattgctgctgtaaaggaacatcaagtgctcatcatcgaaggtgaaacgggatcgggc
aaaactacacaggtgccgcagtaccttgtggatgctggtttcaccaaggataagaagatg
atcggatgcacgcaaccacgtcgtgtggccgccatgtcggtggctgcacgtgtggccgag
gaaatgggcgtgaaactgggcaacgaggtgggctacagcatccgttttgaggactgcacc
tcagaccgcaccattctcaagtacatgactgatggcaccctgcatcgagagttcctgtcg
gaacctgacttggcctcctacagtgtgatgattatcgatgaggctcacgagcggacactg
cacacggacattttgtttggcctggtcaaggatattgctcgtttcaggccggagttgaag
ctccttatttccagtgccactctggatgcggagaagttctctgctttcttcgatgatgca
cccatctttaggatacccggtcgccgctatccagtggatatcttttacacgaaggctcct
gaagcagactacattgatgcgtgttgcgtttcagttttgcagattcatgccactcaaccc
ttaggcgatattctagtattcctcacgggtcaggatgagatcgagacttgccaggaggtt
ctgcaggatcgcgtaaagcggcttggctctaaaatacgtgagctgattgttatacccgtc
tatgcgaatctcccgagtgatatgcaggccaaaatcttcgagcccacgccaccgaatgcc
cgcaaagttatcctggcaaccaatatagcagagacctcgctaaccatcgacaacattata
tatgtgattgatcctgggtttgccaagcagaacaatttcaattcccgtactggcatggag
tcacttatggtggtgcccatttccaaggcttccgcaaatcagcgagcgggcagagcagga
cgaaccgctccaggaaagtgctttcgtctgtacacggcgtgggcatacaagcacgaactg
gaggacaataccgttccggagatacagcgtattaatcttggcaatgcggtgctcatgctc
aaggctctgggcattaatgatctgatacactttgacttcctggaccctccgccgcacgag
acactggtattggctttggaacagctgtatgccctgggtgcactaaaccaccatggagag
ttaaccaagctgggtcgccgtatggccgagtttccagtggatcccatgatgggcaagatg
ctgctggcaagcgaaaaatataaatgctccgaggagatggtgaccattgcagccatgctg
tccgtgaacagcgccattttctacaggcccaaggacaaaatcattcacgcggacactgcc
cgaaaaaacttcaatcacatgcacggcgaccacctgagcctcctgcaggtttacaatcaa
tgggcggagacggactacagcacccagtggtgctatgagaacttcatccagtacagatcg
atgaagcgtgctcgagacgtgagagagcagctggtgggactgatgcagcgtgtcgaaatc
gacatggtcagctgcctgccggagactgtaaatgtgcgcaaggcagccaccgccggatac
ttctaccatgtggcgcgactctccaagggaggtcactacaagaccatcaagcacaatcag
acagtgatgatacacccgaactcctcactctttgaggagctgccgcggtgggtgctctat
cacgagctggtgttcacctccaaggagtacatgcgtcaggttatcgaaatcgagagcaag
tggttgctggaggtggccccgcactactacaaggccaaggagctggaggattctacgaac
aaaaagatgccaaaggtcgccgggcgtgctgaaatggcgcaataa
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